RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 PITPNBP48739 271 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 SLC9A3P48764 834 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 PCBD1P61457 104 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 PRB3Q04118 309 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-203ENST00000420503 MEP1BQ16820 701 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 ZNF404Q494X3 552 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 INTS11Q5TA45 600 aaKnown RBP10.71□□□□□ -0.69
LINC00339-203ENST00000420503 PRAMEF6Q5VXH4 476 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 OLFML2AQ68BL7 652 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 ASPHD2Q6ICH7 369 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 BRICD5Q6PL45 260 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 BTNL3Q6UXE8 466 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 LRRN1Q6UXK5 716 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 UNQ6126/PRO20091Q6UXV3 157 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 ZNF841Q6ZN19 808 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 VTCN1Q7Z7D3 282 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 MUC20Q8N307 709 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-203ENST00000420503 ZDHHC16Q969W1 377 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 NEIL1Q96FI4 390 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-203ENST00000420503 TPD52L3Q96J77 140 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 ZNF583Q96ND8 569 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 TBX15Q96SF7 602 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 PCGF1Q9BSM1 259 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 RERGLQ9H628 205 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 FAM53CQ9NYF3 392 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 ASH2LQ9UBL3 628 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 KIR2DS1A0A191URI9 304 aa10.7□□□□□ -0.7
LINC00339-203ENST00000420503 COX5BP10606 129 aa10.7□□□□□ -0.7
LINC00339-203ENST00000420503 SCRN3Q0VDG4 424 aa10.7□□□□□ -0.7
LINC00339-203ENST00000420503 WDR25Q64LD2 544 aaPredicted RBP10.7□□□□□ -0.7
LINC00339-203ENST00000420503 CORO6Q6QEF8 472 aa10.7□□□□□ -0.7
LINC00339-203ENST00000420503 Q6YL49 198 aa10.7□□□□□ -0.7
LINC00339-203ENST00000420503 C17orf107Q6ZR85 190 aa10.7□□□□□ -0.7
LINC00339-203ENST00000420503 ZER1Q7Z7L7 766 aa10.7□□□□□ -0.7
LINC00339-203ENST00000420503 PDZD9Q8IXQ8 264 aa10.7□□□□□ -0.7
LINC00339-203ENST00000420503 FGFRL1Q8N441 504 aa10.7□□□□□ -0.7
LINC00339-203ENST00000420503 OR8G5Q8NG78 346 aa10.7□□□□□ -0.7
LINC00339-203ENST00000420503 OR1F12Q8NHA8 337 aa10.7□□□□□ -0.7
LINC00339-203ENST00000420503 PRRC1Q96M27 445 aa10.7□□□□□ -0.7
LINC00339-203ENST00000420503 RBM4BQ9BQ04 359 aaKnown RBP10.7□□□□□ -0.7
LINC00339-203ENST00000420503 PRDM13Q9H4Q3 707 aa10.7□□□□□ -0.7
LINC00339-203ENST00000420503 IL20RAQ9UHF4 553 aa10.7□□□□□ -0.7
LINC00339-203ENST00000420503 BAG5Q9UL15 447 aa10.7□□□□□ -0.7
LINC00339-203ENST00000420503 TMCC3Q9ULS5 477 aa10.7□□□□□ -0.7
LINC00339-203ENST00000420503 COA3Q9Y2R0 106 aaPredicted RBP10.7□□□□□ -0.7
LINC00339-203ENST00000420503 TEX13CA0A0J9YWL9 993 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 C5orf63A6NC05 138 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 GMNCA6NCL1 334 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 A6NIZ1 184 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 EFCAB9A8MZ26 197 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 IGHV4-59P01825 116 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 VIMP08670 466 aaKnown RBP10.69□□□□□ -0.7
LINC00339-203ENST00000420503 PPIAL4GP0DN37 164 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 RAC2P15153 192 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 CFHR2P36980 270 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 RAP1BP61224 184 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 RAP1AP62834 184 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 ELF3P78545 371 aaPredicted RBP10.69□□□□□ -0.7
LINC00339-203ENST00000420503 MAB21L1Q13394 359 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 MPPED2Q15777 294 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 RSPO1Q2MKA7 263 aaPredicted RBP10.69□□□□□ -0.7
LINC00339-203ENST00000420503 ARL9Q6T311 187 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 PTCHD4Q6ZW05 846 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 FAM122BQ7Z309 247 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 OAFQ86UD1 273 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 C1orf174Q8IYL3 243 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 OR8B3Q8NGG8 313 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 PTP4A1Q93096 173 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 TSSK2Q96PF2 358 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 OR8B2Q96RD0 313 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 SYT4Q9H2B2 425 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 RASSF4Q9H2L5 321 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 BEX1Q9HBH7 125 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 SMURF1Q9HCE7 757 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 UFSP2Q9NUQ7 469 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 ARMCX1Q9P291 453 aa10.69□□□□□ -0.7
LINC00339-203ENST00000420503 A0A087WUU8 490 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 A0A0G2JND7 137 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 CLPSL1A2RUU4 121 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 PRSS37A4D1T9 235 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 DCTN6O00399 190 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 SLC16A7O60669 478 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 FAM20BO75063 409 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 TROVE2P10155 538 aaKnown RBP eCLIP10.68□□□□□ -0.7
LINC00339-203ENST00000420503 NR2C1P13056 603 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 MMP9P14780 707 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 RPL4P36578 427 aaKnown RBP10.68□□□□□ -0.7
LINC00339-203ENST00000420503 GYS2P54840 703 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 DLX1P56177 255 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 PRKCDQ05655 676 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 AQP6Q13520 282 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 CLEC12AQ5QGZ9 265 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 FAM205BPQ63HN1 556 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 SFRP4Q6FHJ7 346 aaPredicted RBP10.68□□□□□ -0.7
LINC00339-203ENST00000420503 FBXW12Q6X9E4 464 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 TSEN54Q7Z6J9 526 aaKnown RBP10.68□□□□□ -0.7
LINC00339-203ENST00000420503 SYT9Q86SS6 491 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 NAA40Q86UY6 237 aa10.68□□□□□ -0.7
LINC00339-203ENST00000420503 BOLLQ8N9W6 283 aaKnown RBP10.68□□□□□ -0.7
LINC00339-203ENST00000420503 OR4F5Q8NH21 305 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms