RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 ST7LQ8TDW4 575 aa17.75■□□□□ 0.43
HMGXB4-203ENST00000420166 RDH12Q96NR8 316 aa17.75■□□□□ 0.43
HMGXB4-203ENST00000420166 CACNG6Q9BXT2 260 aa17.75■□□□□ 0.43
HMGXB4-203ENST00000420166 MRPL37Q9BZE1 423 aaKnown RBP17.75■□□□□ 0.43
HMGXB4-203ENST00000420166 GSX2Q9BZM3 304 aa17.75■□□□□ 0.43
HMGXB4-203ENST00000420166 PLK3Q9H4B4 646 aa17.75■□□□□ 0.43
HMGXB4-203ENST00000420166 DDX28Q9NUL7 540 aaKnown RBP17.75■□□□□ 0.43
HMGXB4-203ENST00000420166 SMPD3Q9NY59 655 aaPredicted RBP17.75■□□□□ 0.43
HMGXB4-203ENST00000420166 H2AFY2Q9P0M6 372 aaPredicted RBP17.75■□□□□ 0.43
HMGXB4-203ENST00000420166 GRIP1Q9Y3R0 1128 aa17.75■□□□□ 0.43
HMGXB4-203ENST00000420166 TMEM129A0AVI4 362 aa17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 DLGAP1O14490 977 aa17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 NGFP01138 241 aa17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 NAA10P41227 235 aaPredicted RBP17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 PTH2RP49190 550 aa17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 SNRPD2P62316 118 aaKnown RBP17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 EIF2B1Q14232 305 aaKnown RBP17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 RSPO1Q2MKA7 263 aaPredicted RBP17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 OGFRL1Q5TC84 451 aaPredicted RBP17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 MEPCEQ7L2J0 689 aaKnown RBP17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 C1orf174Q8IYL3 243 aa17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 LRRC75A-AS1Q8N1F1 130 aa17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 IPCEF1Q8WWN9 437 aaPredicted RBP17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 SLAMF6Q96DU3 332 aa17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 CXXC4Q9H2H0 198 aa17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 TBCCD1Q9NVR7 557 aa17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 NKX1-2Q9UD57 310 aaPredicted RBP17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 FZR1Q9UM11 496 aa17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 GMPPBQ9Y5P6 360 aa17.74■□□□□ 0.43
HMGXB4-203ENST00000420166 OTOGQ6ZRI0 2925 aa17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 SLC22A31A6NKX4 558 aa17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 BMP4P12644 408 aa17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 ZNF250P15622 560 aa17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 EVX1P49640 407 aa17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 RGS6P49758 472 aa17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 PPP1CBP62140 327 aa17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 GGTLC2Q14390 218 aa17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 ZNF771Q7L3S4 317 aaPredicted RBP17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 SLC16A9Q7RTY1 509 aa17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 LRP11Q86VZ4 500 aa17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 OTOSQ8NHW6 89 aa17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 TRUB1Q8WWH5 349 aaKnown RBP17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 TRMT61AQ96FX7 289 aaKnown RBP17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 PERPQ96FX8 193 aa17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 SYT3Q9BQG1 590 aa17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 ABHD6Q9BV23 337 aa17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 RNPEPL1Q9HAU8 725 aa17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 FAM118AQ9NWS6 357 aa17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 PMF1-BGLAPU3KQ54 211 aa17.73■□□□□ 0.43
HMGXB4-203ENST00000420166 ZNF878C9JN71 531 aa17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 H0YHG0 523 aa17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 H7C417 338 aa17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 ACSM4P0C7M7 580 aa17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 TESK1Q15569 626 aa17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 SPATA46Q5T0L3 261 aa17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 ZNF454Q8N9F8 522 aa17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 SLC25A40Q8TBP6 338 aa17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 UBE2FQ969M7 185 aa17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 MARS2Q96GW9 593 aaKnown RBP17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 ZNF582Q96NG8 517 aaPredicted RBP17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 DOK1Q99704 481 aa17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 COPS4Q9BT78 406 aa17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 YIPF3Q9GZM5 350 aa17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 CENPMQ9NSP4 180 aa17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 DNAJC27Q9NZQ0 273 aa17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 MYEF2Q9P2K5 600 aaKnown RBP17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 FBXO9Q9UK97 447 aaPredicted RBP17.72■□□□□ 0.43
HMGXB4-203ENST00000420166 IGLV3-9A0A075B6K5 115 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 F5H5K5 113 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 H3BSA7 217 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 J3QW42 95 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 SLC16A6O15403 523 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 MRPL3P09001 348 aaKnown RBP17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 OTX1P32242 354 aaPredicted RBP17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 NUDT6P53370 316 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 ATP5J2P56134 94 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 KLF3P57682 345 aaPredicted RBP17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 SELENOVP59797 346 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 SNRPGP62308 76 aaKnown RBP17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 SLC34A1Q06495 639 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 ZNF718Q3SXZ3 478 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 SPATC1Q76KD6 591 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 SYNPRQ8TBG9 265 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 RNF133Q8WVZ7 376 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 SPTSSAQ969W0 71 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 AMELYQ99218 206 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 CNN2Q99439 309 aaKnown RBP17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 OR2J1Q9GZK6 312 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 HAO2Q9NYQ3 351 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 WARS2Q9UGM6 360 aaKnown RBP17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 DUSP13Q9UII6 198 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 KLHDC2Q9Y2U9 406 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 STARD10Q9Y365 291 aa17.71■□□□□ 0.43
HMGXB4-203ENST00000420166 LOC100130705A0A1B0GUX0 176 aa17.7■□□□□ 0.42
HMGXB4-203ENST00000420166 M0R135 149 aa17.7■□□□□ 0.42
HMGXB4-203ENST00000420166 CLPTM1O96005 669 aa17.7■□□□□ 0.42
HMGXB4-203ENST00000420166 LYNP07948 512 aa17.7■□□□□ 0.42
HMGXB4-203ENST00000420166 TUBG1P23258 451 aa17.7■□□□□ 0.42
HMGXB4-203ENST00000420166 HTR1FP30939 366 aa17.7■□□□□ 0.42
HMGXB4-203ENST00000420166 MPV17P39210 176 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms