RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 PPP1R3EQ9H7J1 279 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 BCO1Q9HAY6 547 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 GTF2A1LQ9UNN4 478 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 RAXQ9Y2V3 346 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 AK6Q9Y3D8 172 aaKnown RBP18.46■□□□□ 0.55
GPC1-202ENST00000420138 PCDHGA9Q9Y5G4 932 aaKnown RBP18.46■□□□□ 0.55
GPC1-202ENST00000420138 K7ENP7 123 aa18.45■□□□□ 0.54
GPC1-202ENST00000420138 TFECO14948 347 aaPredicted RBP18.45■□□□□ 0.54
GPC1-202ENST00000420138 PDGFAP04085 211 aa18.45■□□□□ 0.54
GPC1-202ENST00000420138 SLC2A2P11168 524 aaPredicted RBP18.45■□□□□ 0.54
GPC1-202ENST00000420138 ZNF84P51523 738 aa18.45■□□□□ 0.54
GPC1-202ENST00000420138 ASAH1Q13510 395 aa18.45■□□□□ 0.54
GPC1-202ENST00000420138 FAM27BQ5VT28 67 aa18.45■□□□□ 0.54
GPC1-202ENST00000420138 INO80CQ6PI98 192 aaPredicted RBP18.45■□□□□ 0.54
GPC1-202ENST00000420138 TUSC5Q8IXB3 177 aa18.45■□□□□ 0.54
GPC1-202ENST00000420138 SLC25A18Q9H1K4 315 aa18.45■□□□□ 0.54
GPC1-202ENST00000420138 EXO5Q9H790 373 aa18.45■□□□□ 0.54
GPC1-202ENST00000420138 RNF122Q9H9V4 155 aa18.45■□□□□ 0.54
GPC1-202ENST00000420138 ANKRD61A6NGH8 418 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 NOTOA8MTQ0 251 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 EPXP11678 715 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 MAPK3P27361 379 aaPredicted RBP18.44■□□□□ 0.54
GPC1-202ENST00000420138 RIN1Q13671 783 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 ASPHD2Q6ICH7 369 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 ZADH2Q8N4Q0 377 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 TMEM106AQ96A25 262 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 DDX28Q9NUL7 540 aaKnown RBP18.44■□□□□ 0.54
GPC1-202ENST00000420138 NOSIPQ9Y314 301 aaKnown RBP18.44■□□□□ 0.54
GPC1-202ENST00000420138 CACNA1CQ13936 2221 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 TRAV8-7A0A075B6U6 113 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 ZNF724A8MTY0 619 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 FAM25AB3EWG3 89 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 FAM25CB3EWG5 89 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 FAM25GB3EWG6 89 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 SSX4O60224 188 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 DOK2O60496 412 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 RAF1P04049 648 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 ISG15P05161 165 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 ADRA2CP18825 462 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 ATF1P18846 271 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 ANOS1P23352 680 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 APEX1P27695 318 aaKnown RBP18.44■□□□□ 0.54
GPC1-202ENST00000420138 GUCA1AP43080 201 aaPredicted RBP18.44■□□□□ 0.54
GPC1-202ENST00000420138 TMPRSS3P57727 454 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 IL18Q14116 193 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 TSPO2Q5TGU0 170 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 NRARPQ7Z6K4 114 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 LRRTM1Q86UE6 522 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 GPR137CQ8N3F9 429 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 LRRC18Q8N456 261 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 FBXO17Q96EF6 278 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 GPR35Q9HC97 309 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 TMEM38BQ9NVV0 291 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 CLEC4AQ9UMR7 237 aa18.44■□□□□ 0.54
GPC1-202ENST00000420138 ZNF407Q9C0G0 2248 aa18.43■□□□□ 0.54
GPC1-202ENST00000420138 RFX2P48378 723 aa18.43■□□□□ 0.54
GPC1-202ENST00000420138 TAB1Q15750 504 aa18.43■□□□□ 0.54
GPC1-202ENST00000420138 ZNF544Q6NX49 715 aa18.43■□□□□ 0.54
GPC1-202ENST00000420138 STAC2Q6ZMT1 411 aa18.43■□□□□ 0.54
GPC1-202ENST00000420138 ASB5Q8WWX0 329 aa18.43■□□□□ 0.54
GPC1-202ENST00000420138 TAAR6Q96RI8 345 aa18.43■□□□□ 0.54
GPC1-202ENST00000420138 A0A1B0GVC2 190 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 K7EM74 188 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 MRPL33O75394 65 aaKnown RBP18.42■□□□□ 0.54
GPC1-202ENST00000420138 TGM6O95932 706 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 TTRP02766 147 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 ELK1P19419 428 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 CTSSP25774 331 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 UCNP55089 124 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 PSMA6P60900 246 aaKnown RBP18.42■□□□□ 0.54
GPC1-202ENST00000420138 CEACAM16Q2WEN9 425 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 CCDC92Q53HC0 331 aaPredicted RBP18.42■□□□□ 0.54
GPC1-202ENST00000420138 LRRC28Q86X40 367 aaPredicted RBP18.42■□□□□ 0.54
GPC1-202ENST00000420138 SIAH3Q8IW03 269 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 ELMOD2Q8IZ81 293 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 HPS1Q92902 700 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 LINC00470Q9BZP3 86 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 PRDM14Q9GZV8 571 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 SLC22A4Q9H015 551 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 NIPAL2Q9H841 368 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 EMC3Q9P0I2 261 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 MALT1Q9UDY8 824 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 ARPC4-TTLL3A0A0A6YYG9 625 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 MKRN2OSH3BPM6 223 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 PAHP00439 452 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 NPR2P20594 1047 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 CD300CQ08708 224 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 MADCAM1Q13477 382 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 ZNF169Q14929 603 aaPredicted RBP18.42■□□□□ 0.54
GPC1-202ENST00000420138 RNPS1Q15287 305 aaKnown RBP18.42■□□□□ 0.54
GPC1-202ENST00000420138 P2RY14Q15391 338 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 RSPO1Q2MKA7 263 aaPredicted RBP18.42■□□□□ 0.54
GPC1-202ENST00000420138 KLHL24Q6TFL4 600 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 Q8N402 240 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 CELF2-AS1Q8N7Q2 184 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 GJC3Q8NFK1 279 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 PRRG4Q9BZD6 226 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 PBOV1Q9GZY1 135 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 SLCO5A1Q9H2Y9 848 aa18.42■□□□□ 0.54
GPC1-202ENST00000420138 CALHM2Q9HA72 323 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms