RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 DPPA2Q7Z7J5 298 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 ZNF584Q8IVC4 421 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 CDK20Q8IZL9 346 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 CLDN22Q8N7P3 220 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 OR4F15Q8NGB8 312 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 OR4K5Q8NGD3 323 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 OR52J3Q8NH60 311 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 MUL1Q969V5 352 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 MCUR1Q96AQ8 359 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 FBXO17Q96EF6 278 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 NSL1Q96IY1 281 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 TNFRSF13CQ96RJ3 184 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 SH3GL3Q99963 347 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 FUZQ9BT04 418 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 DENND2DQ9H6A0 471 aaPredicted RBP5.96□□□□□ -1.46
HMGN1-205ENST00000419378 ZNF442Q9H7R0 627 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 HEYLQ9NQ87 328 aaPredicted RBP5.96□□□□□ -1.46
HMGN1-205ENST00000419378 DKK2Q9UBU2 259 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 FBXL3Q9UKT7 428 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 ZNF346Q9UL40 294 aaKnown RBP5.96□□□□□ -1.46
HMGN1-205ENST00000419378 NDRG4Q9ULP0 352 aaKnown RBP5.96□□□□□ -1.46
HMGN1-205ENST00000419378 UGT2A1Q9Y4X1 527 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 ARFGEF3Q5TH69 2177 aa5.96□□□□□ -1.46
HMGN1-205ENST00000419378 SH3PXD2BA1X283 911 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 A6NIZ1 184 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 B9A039 149 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 H7C1C5 153 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 SSX4O60224 188 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 GADD45GO95257 159 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 SERPINA5P05154 406 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 FABP3P05413 133 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 CD14P08571 375 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 MMP7P09237 267 aaPredicted RBP5.95□□□□□ -1.46
HMGN1-205ENST00000419378 T-ENOLP0DO92 83 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 ZNF35P13682 527 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 NPR2P20594 1047 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 RRM2P31350 389 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 CDAP32320 146 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 RPL4P36578 427 aaKnown RBP5.95□□□□□ -1.46
HMGN1-205ENST00000419378 NUDT6P53370 316 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 RAP1BP61224 184 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 LCN6P62502 163 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 RAP1AP62834 184 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 MRPS34P82930 218 aaKnown RBP5.95□□□□□ -1.46
HMGN1-205ENST00000419378 RAB35Q15286 201 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 ZBED5Q49AG3 693 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 MESTQ5EB52 335 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 LCN8Q6JVE9 175 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 KRT80Q6KB66 452 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 PGBD2Q6P3X8 592 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 SLC25A47Q6Q0C1 308 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 CLEC9AQ6UXN8 241 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 FOXL2NBQ6ZUU3 175 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 FAM122BQ7Z309 247 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 ZDHHC21Q8IVQ6 265 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 ARHGAP24Q8N264 748 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 ARIH2OSQ8N7S6 290 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 FNDC8Q8TC99 324 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 NSMAFQ92636 917 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 NABP1Q96AH0 204 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 RSRC1Q96IZ7 334 aaKnown RBP5.95□□□□□ -1.46
HMGN1-205ENST00000419378 Q96M85 177 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 ZNF570Q96NI8 536 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 GPA33Q99795 319 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 NDEL1Q9GZM8 345 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 PLK3Q9H4B4 646 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 SIAEQ9HAT2 523 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 IL1RAPQ9NPH3 570 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 KRCC1Q9NPI7 259 aaPredicted RBP5.95□□□□□ -1.46
HMGN1-205ENST00000419378 ACTR3BQ9P1U1 418 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 ADAM21Q9UKJ8 722 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 SIGLEC7Q9Y286 467 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 ADAM18Q9Y3Q7 739 aa5.95□□□□□ -1.46
HMGN1-205ENST00000419378 FN1P02751 2386 aaKnown RBP5.94□□□□□ -1.46
HMGN1-205ENST00000419378 IGHV4-30-2A0A087WSY4 118 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 TEX13CA0A0J9YWL9 993 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 SLC22A23A1A5C7 686 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 XKRYO14609 159 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 RGS10O43665 173 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 GPRIN2O60269 458 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 MGRN1O60291 552 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 PTP4A3O75365 173 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 LY6HO94772 140 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 NDUFB2O95178 105 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 LY6G6DO95868 133 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 HEXAP06865 529 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 FPR3P25089 353 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 PPIFP30405 207 aaKnown RBP5.94□□□□□ -1.46
HMGN1-205ENST00000419378 GLRXP35754 106 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 EFNA4P52798 201 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 SMIM11AP58511 58 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 FXYD6P3P58550 94 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 RPS23P62266 143 aaKnown RBP5.94□□□□□ -1.46
HMGN1-205ENST00000419378 GALK2Q01415 458 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 KRR1Q13601 381 aaKnown RBP5.94□□□□□ -1.46
HMGN1-205ENST00000419378 MTX3Q5HYI7 312 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 THEM4Q5T1C6 240 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 TMEM53Q6P2H8 277 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 CLEC2AQ6UVW9 174 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 Q71RC1 249 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms