RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 ECH1Q13011 328 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 GGTLC2Q14390 218 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 NXNL2Q5VZ03 156 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 MBNL2Q5VZF2 373 aaKnown RBP15.99■□□□□ 0.15
PTCD3-204ENST00000418628 DCXRQ7Z4W1 244 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 TCEANCQ8N8B7 351 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 WFDC11Q8NEX6 87 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 OR1J1Q8NGS3 322 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 OR2AJ1Q8NGZ0 328 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 ZMYND19Q96E35 227 aaPredicted RBP15.99■□□□□ 0.15
PTCD3-204ENST00000418628 SORCS2Q96PQ0 1159 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 MBOAT4Q96T53 435 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 PITX2Q99697 317 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 OR51V1Q9H2C8 321 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 OR51B6Q9H340 312 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 POFUT1Q9H488 388 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 RIBC2Q9H4K1 309 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 ELOVL3Q9HB03 270 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 DYSFO75923 2080 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 TLN2Q9Y4G6 2542 aa15.99■□□□□ 0.15
PTCD3-204ENST00000418628 VSTM5A8MXK1 200 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 ZNF593O00488 134 aaPredicted RBP15.98■□□□□ 0.15
PTCD3-204ENST00000418628 DLGAP1O14490 977 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 ABHD16AO95870 558 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 IGHV3-13P01766 116 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 SPARCP09486 303 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 ACSM4P0C7M7 580 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 ANPEPP15144 967 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 TUBG1P23258 451 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 RGS6P49758 472 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 RAD23AP54725 363 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 PPP1CBP62140 327 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 APOFQ13790 326 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 RCN1Q15293 331 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.98■□□□□ 0.154e-7■■■■■ 33.2
PTCD3-204ENST00000418628 UNQ6126/PRO20091Q6UXV3 157 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 DPY19L4Q7Z388 723 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 TGIF2LYQ8IUE0 185 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 ERI1Q8IV48 349 aaKnown RBP15.98■□□□□ 0.15
PTCD3-204ENST00000418628 OR6N2Q8NGY6 317 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 ABHD4Q8TB40 342 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 SLC25A40Q8TBP6 338 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 SYT3Q9BQG1 590 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 CDADC1Q9BWV3 514 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 C1QTNF5Q9BXJ0 243 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 TUBG2Q9NRH3 451 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 EIF3KQ9UBQ5 218 aaKnown RBP15.98■□□□□ 0.15
PTCD3-204ENST00000418628 PMF1-BGLAPU3KQ54 211 aa15.98■□□□□ 0.15
PTCD3-204ENST00000418628 SELENOFO60613 162 aa15.97■□□□□ 0.15
PTCD3-204ENST00000418628 CLPTM1O96005 669 aa15.97■□□□□ 0.15
PTCD3-204ENST00000418628 LCKP06239 509 aa15.97■□□□□ 0.15
PTCD3-204ENST00000418628 BMP4P12644 408 aa15.97■□□□□ 0.15
PTCD3-204ENST00000418628 MPV17P39210 176 aa15.97■□□□□ 0.15
PTCD3-204ENST00000418628 KLF3P57682 345 aaPredicted RBP15.97■□□□□ 0.15
PTCD3-204ENST00000418628 ZBTB49Q6ZSB9 765 aa15.97■□□□□ 0.15
PTCD3-204ENST00000418628 RHOUQ7L0Q8 258 aa15.97■□□□□ 0.15
PTCD3-204ENST00000418628 OTOSQ8NHW6 89 aa15.97■□□□□ 0.15
PTCD3-204ENST00000418628 SYNPRQ8TBG9 265 aa15.97■□□□□ 0.15
PTCD3-204ENST00000418628 KLF14Q8TD94 323 aaPredicted RBP15.97■□□□□ 0.15
PTCD3-204ENST00000418628 RNF133Q8WVZ7 376 aa15.97■□□□□ 0.15
PTCD3-204ENST00000418628 OTULINQ96BN8 352 aa15.97■□□□□ 0.15
PTCD3-204ENST00000418628 SLAMF6Q96DU3 332 aa15.97■□□□□ 0.15
PTCD3-204ENST00000418628 AMELYQ99218 206 aa15.97■□□□□ 0.15
PTCD3-204ENST00000418628 TEAD3Q99594 435 aa15.97■□□□□ 0.15
PTCD3-204ENST00000418628 OR2J1Q9GZK6 312 aa15.97■□□□□ 0.15
PTCD3-204ENST00000418628 TOR3AQ9H497 397 aa15.97■□□□□ 0.15
PTCD3-204ENST00000418628 BARX1Q9HBU1 254 aaPredicted RBP15.97■□□□□ 0.15
PTCD3-204ENST00000418628 FZR1Q9UM11 496 aa15.97■□□□□ 0.15
PTCD3-204ENST00000418628 ABCA1O95477 2261 aa15.96■□□□□ 0.15
PTCD3-204ENST00000418628 ERICH4A6NGS2 130 aa15.96■□□□□ 0.15
PTCD3-204ENST00000418628 ZNF878C9JN71 531 aa15.96■□□□□ 0.15
PTCD3-204ENST00000418628 M0R233 179 aa15.96■□□□□ 0.15
PTCD3-204ENST00000418628 CASQ2O14958 399 aaPredicted RBP15.96■□□□□ 0.15
PTCD3-204ENST00000418628 TLX2O43763 284 aaPredicted RBP15.96■□□□□ 0.15
PTCD3-204ENST00000418628 ANOS1P23352 680 aa15.96■□□□□ 0.15
PTCD3-204ENST00000418628 EFNA4P52798 201 aa15.96■□□□□ 0.15
PTCD3-204ENST00000418628 ELF3P78545 371 aaPredicted RBP15.96■□□□□ 0.15
PTCD3-204ENST00000418628 KLHL12Q53G59 568 aa15.96■□□□□ 0.15
PTCD3-204ENST00000418628 ARL9Q6T311 187 aa15.96■□□□□ 0.15
PTCD3-204ENST00000418628 SHFQ7M4L6 423 aa15.96■□□□□ 0.15
PTCD3-204ENST00000418628 BCDIN3DQ7Z5W3 292 aaKnown RBP15.96■□□□□ 0.15
PTCD3-204ENST00000418628 OR8J1Q8NGP2 316 aa15.96■□□□□ 0.15
PTCD3-204ENST00000418628 APOBEC3DQ96AK3 386 aaPredicted RBP15.96■□□□□ 0.15
PTCD3-204ENST00000418628 EME1Q96AY2 570 aa15.96■□□□□ 0.15
PTCD3-204ENST00000418628 ABHD6Q9BV23 337 aa15.96■□□□□ 0.15
PTCD3-204ENST00000418628 DLL4Q9NR61 685 aa15.96■□□□□ 0.15
PTCD3-204ENST00000418628 HAO2Q9NYQ3 351 aa15.96■□□□□ 0.15
PTCD3-204ENST00000418628 GRIP1Q9Y3R0 1128 aa15.96■□□□□ 0.15
PTCD3-204ENST00000418628 ORC6Q9Y5N6 252 aa15.96■□□□□ 0.15
PTCD3-204ENST00000418628 BAG2O95816 211 aa15.95■□□□□ 0.14
PTCD3-204ENST00000418628 OPRL1P41146 370 aa15.95■□□□□ 0.14
PTCD3-204ENST00000418628 ZNF718Q3SXZ3 478 aa15.95■□□□□ 0.14
PTCD3-204ENST00000418628 SLC25A30Q5SVS4 291 aa15.95■□□□□ 0.14
PTCD3-204ENST00000418628 SPATA46Q5T0L3 261 aa15.95■□□□□ 0.14
PTCD3-204ENST00000418628 LCN1P1Q5VSP4 162 aa15.95■□□□□ 0.14
PTCD3-204ENST00000418628 TMEM154Q6P9G4 183 aa15.95■□□□□ 0.14
PTCD3-204ENST00000418628 FBXW12Q6X9E4 464 aa15.95■□□□□ 0.14
PTCD3-204ENST00000418628 MEPCEQ7L2J0 689 aaKnown RBP15.95■□□□□ 0.14
PTCD3-204ENST00000418628 GID4Q8IVV7 300 aa15.95■□□□□ 0.14
PTCD3-204ENST00000418628 ZNF454Q8N9F8 522 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms