RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 AKAP14Q86UN6 197 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 HIST2H2ABQ8IUE6 130 aaPredicted RBP8□□□□□ -1.13
LINCMD1-201ENST00000418518 NKAIN3Q8N8D7 197 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 DNAAF1Q8NEP3 725 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 DEFB124Q8NES8 71 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 OR6M1Q8NGM8 313 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 OR6N1Q8NGY5 312 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 SYNPRQ8TBG9 265 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 DEDD2Q8WXF8 326 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 CPNE4Q96A23 557 aaPredicted RBP8□□□□□ -1.13
LINCMD1-201ENST00000418518 CREB3L1Q96BA8 519 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 SIGLEC12Q96PQ1 595 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 PBOV1Q9GZY1 135 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 ASCL3Q9NQ33 180 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 CENPMQ9NSP4 180 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 CKLFQ9UBR5 152 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 B4GALT7Q9UBV7 327 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 GTF2A1LQ9UNN4 478 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 POLR1DQ9Y2S0 133 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 CACNG2Q9Y698 323 aa8□□□□□ -1.13
LINCMD1-201ENST00000418518 RTTNQ86VV8 2226 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 IGHV3-15A0A0B4J1V0 119 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 LOC100289279A0A1B0GTE1 492 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 LINC00854A0A1B0GVQ3 168 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 FAM240BA0A1B0GVZ2 78 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 HMX3A6NHT5 357 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 H0YC42 278 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 EIF1AYO14602 144 aaKnown RBP7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 CXCL13O43927 109 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 NME2P1O60361 137 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 WDPCPO95876 746 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 MAS1P04201 325 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 ITGA5P08648 1049 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 POU3F2P20265 443 aaPredicted RBP7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 NME2P22392 152 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 CDK2P24941 298 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 ITGA3P26006 1051 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 HSD11B1P28845 292 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 DDOSTP39656 456 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 INPP1P49441 399 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 LHX2P50458 406 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 ZNF84P51523 738 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 TPTEP56180 551 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 CLDN12P56749 244 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 CARD18P57730 90 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 CD300CQ08708 224 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 BCL2A1Q16548 175 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 ODF4Q2M2E3 257 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 WIPI1Q5MNZ9 446 aaPredicted RBP7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 PDSS1Q5T2R2 415 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 FAM27BQ5VT28 67 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 ZNF57Q68EA5 555 aaPredicted RBP7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 SPINK14Q6IE38 97 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 ANKRD16Q6P6B7 361 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 PLET1Q6UQ28 207 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 PRSS45Q7RTY3 260 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 CDH24Q86UP0 819 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 CDH26Q8IXH8 852 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 CLEC1AQ8NC01 280 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 CCDC54Q8NEL0 328 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 PRSS33Q8NF86 280 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 GJC3Q8NFK1 279 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 OR13C3Q8NGS6 347 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 OR10D3Q8NH80 312 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 CPT1CQ8TCG5 803 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 HPS1Q92902 700 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 PTX4Q96A99 478 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 FAM3DQ96BQ1 224 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 UPRTQ96BW1 309 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 FOXRED1Q96CU9 486 aaPredicted RBP7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 S100A16Q96FQ6 103 aaKnown RBP7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 SMAD5Q99717 465 aaKnown RBP7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 ZNF416Q9BWM5 594 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 HDHD2Q9H0R4 259 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 MMP28Q9H239 520 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 SEC61A2Q9H9S3 476 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 TAS2R4Q9NYW5 299 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 ASH2LQ9UBL3 628 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 KLF13Q9Y2Y9 288 aaPredicted RBP7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 CACNA1GO43497 2377 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 WDFY4Q6ZS81 3184 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 WDFY3Q8IZQ1 3526 aa7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 TNRC6AQ8NDV7 1962 aaKnown RBP7.99□□□□□ -1.13
LINCMD1-201ENST00000418518 A0A0A6YYH2 397 aa7.98□□□□□ -1.13
LINCMD1-201ENST00000418518 A0A0U1RQV5 110 aa7.98□□□□□ -1.13
LINCMD1-201ENST00000418518 A0A1B0GVC2 190 aa7.98□□□□□ -1.13
LINCMD1-201ENST00000418518 CIB4A0PJX0 185 aa7.98□□□□□ -1.13
LINCMD1-201ENST00000418518 OR5H15A6NDH6 313 aa7.98□□□□□ -1.13
LINCMD1-201ENST00000418518 A6NIN4 97 aa7.98□□□□□ -1.13
LINCMD1-201ENST00000418518 A6NJ64 397 aa7.98□□□□□ -1.13
LINCMD1-201ENST00000418518 ACOT7O00154 380 aa7.98□□□□□ -1.13
LINCMD1-201ENST00000418518 P2RY10O00398 339 aa7.98□□□□□ -1.13
LINCMD1-201ENST00000418518 RER1O15258 196 aa7.98□□□□□ -1.13
LINCMD1-201ENST00000418518 XRCC3O43542 346 aa7.98□□□□□ -1.13
LINCMD1-201ENST00000418518 KRT33AO76009 404 aa7.98□□□□□ -1.13
LINCMD1-201ENST00000418518 CST2P09228 141 aa7.98□□□□□ -1.13
LINCMD1-201ENST00000418518 GABRA1P14867 456 aa7.98□□□□□ -1.13
LINCMD1-201ENST00000418518 NBL1P41271 181 aa7.98□□□□□ -1.13
LINCMD1-201ENST00000418518 EIF1AXP47813 144 aaKnown RBP7.98□□□□□ -1.13
LINCMD1-201ENST00000418518 POU3F4P49335 361 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms