RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 RFPL4AA6NLU0 287 aa12.93□□□□□ -0.34
HDAC9-208ENST00000417496 A8MXK9 166 aa12.93□□□□□ -0.34
HDAC9-208ENST00000417496 FAM25EA8MYX2 175 aa12.93□□□□□ -0.34
HDAC9-208ENST00000417496 NPIPA5E9PKD4 350 aa12.93□□□□□ -0.34
HDAC9-208ENST00000417496 RFPL4AL1F8VTS6 287 aa12.93□□□□□ -0.34
HDAC9-208ENST00000417496 CD27P26842 260 aa12.93□□□□□ -0.34
HDAC9-208ENST00000417496 PTGS2P35354 604 aa12.93□□□□□ -0.34
HDAC9-208ENST00000417496 PAPD4Q6PIY7 484 aaKnown RBP12.93□□□□□ -0.34
HDAC9-208ENST00000417496 SYT13Q7L8C5 426 aa12.93□□□□□ -0.34
HDAC9-208ENST00000417496 FJX1Q86VR8 437 aa12.93□□□□□ -0.34
HDAC9-208ENST00000417496 PDZD9Q8IXQ8 264 aa12.93□□□□□ -0.34
HDAC9-208ENST00000417496 PAQR4Q8N4S7 273 aaPredicted RBP12.93□□□□□ -0.34
HDAC9-208ENST00000417496 ZNF441Q8N8Z8 693 aa12.93□□□□□ -0.34
HDAC9-208ENST00000417496 MRGPRFQ96AM1 343 aa12.93□□□□□ -0.34
HDAC9-208ENST00000417496 ADAT3Q96EY9 351 aaPredicted RBP12.93□□□□□ -0.34
HDAC9-208ENST00000417496 PDCD10Q9BUL8 212 aa12.93□□□□□ -0.34
HDAC9-208ENST00000417496 SHARPINQ9H0F6 387 aa12.93□□□□□ -0.34
HDAC9-208ENST00000417496 TMEM185BQ9H7F4 350 aa12.93□□□□□ -0.34
HDAC9-208ENST00000417496 GDF2Q9UK05 429 aaPredicted RBP12.93□□□□□ -0.34
HDAC9-208ENST00000417496 NPIPA1Q9UND3 350 aa12.93□□□□□ -0.34
HDAC9-208ENST00000417496 SLC5A6Q9Y289 635 aa12.93□□□□□ -0.34
HDAC9-208ENST00000417496 NUP210LQ5VU65 1888 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 LMO7DNF2Z398 122 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 RAB27BO00194 218 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 H2BFMP0C1H6 154 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 RPA2P15927 270 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 AVPR2P30518 371 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 RNF4P78317 190 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 UNC119Q13432 240 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 UBXN2BQ14CS0 331 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 MPPED2Q15777 294 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 ZNF584Q8IVC4 421 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 NAXDQ8IW45 347 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 BVESQ8NE79 360 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 CCDC107Q8WV48 283 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 ASB10Q8WXI3 467 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 ST8SIA4Q92187 359 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 THRSPQ92748 146 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 ZNF75AQ96N20 296 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 SLC25A21Q9BQT8 299 aaPredicted RBP12.92□□□□□ -0.34
HDAC9-208ENST00000417496 SOX7Q9BT81 388 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 LMAN1LQ9HAT1 526 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 UPB1Q9UBR1 384 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 FREM2Q5SZK8 3169 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 ASCC3Q8N3C0 2202 aaKnown RBP12.92□□□□□ -0.34
HDAC9-208ENST00000417496 METTL12A8MUP2 240 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 OR2T1O43869 369 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 GNB3P16520 340 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 FSTP19883 344 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 ANOS1P23352 680 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 CALCRP30988 508 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 FOXK1P85037 733 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 TLE3Q04726 772 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 ATRAIDQ6UW56 229 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 TRAPPC6BQ86SZ2 158 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 OR6K3Q8NGY3 331 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 CST11Q9H112 138 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 SLC2A4RGQ9NR83 387 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 SLC22A11Q9NSA0 550 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 RHBDD3Q9Y3P4 386 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 SESN1Q9Y6P5 492 aa12.92□□□□□ -0.34
HDAC9-208ENST00000417496 OR14I1A6ND48 311 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 FGF2P09038 288 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 SLC2A1P11166 492 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 CD34P28906 385 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 CAPZA1P52907 286 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 PPP1R1AQ13522 171 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 INPP5JQ15735 1006 aaPredicted RBP12.91□□□□□ -0.34
HDAC9-208ENST00000417496 RAB30Q15771 203 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 ZNF813Q6ZN06 617 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 LYPD6Q86Y78 171 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 CASTOR1Q8WTX7 329 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 ZBTB8AQ96BR9 441 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 MVB12AQ96EY5 273 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 C5orf34Q96MH7 638 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 KCNK17Q96T54 332 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 FGF21Q9NSA1 209 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 TTLL8A6PVC2 850 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 IGHMP01871 453 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 ATP1B3P54709 279 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 BIDP55957 195 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 HSF1Q00613 529 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 SSBP1Q04837 148 aaKnown RBP12.91□□□□□ -0.34
HDAC9-208ENST00000417496 H1FNTQ75WM6 255 aaPredicted RBP12.91□□□□□ -0.34
HDAC9-208ENST00000417496 SLC51BQ86UW2 128 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 SLC38A9Q8NBW4 561 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 OR13C9Q8NGT0 318 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 OR2I1PQ8NGU4 316 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 ST8SIA2Q92186 375 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 CA14Q9ULX7 337 aa12.91□□□□□ -0.34
HDAC9-208ENST00000417496 ARID1AO14497 2285 aa12.9□□□□□ -0.34
HDAC9-208ENST00000417496 A0A1B0GX78 115 aa12.9□□□□□ -0.34
HDAC9-208ENST00000417496 TRIM77I1YAP6 450 aa12.9□□□□□ -0.34
HDAC9-208ENST00000417496 SULT1C2O00338 296 aa12.9□□□□□ -0.34
HDAC9-208ENST00000417496 EFNA2O43921 213 aa12.9□□□□□ -0.34
HDAC9-208ENST00000417496 HPP00738 406 aa12.9□□□□□ -0.34
HDAC9-208ENST00000417496 TTRP02766 147 aa12.9□□□□□ -0.34
HDAC9-208ENST00000417496 CD74P04233 296 aa12.9□□□□□ -0.34
HDAC9-208ENST00000417496 VAMP1P23763 118 aa12.9□□□□□ -0.34
HDAC9-208ENST00000417496 HRH1P35367 487 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms