RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ZNF101Q8IZC7 436 aa19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 OR8J1Q8NGP2 316 aa19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 SPTSSAQ969W0 71 aa19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 MAP6Q96JE9 813 aa19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 IL4I1Q96RQ9 567 aa19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 DOK1Q99704 481 aa19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 MRPL37Q9BZE1 423 aaKnown RBP19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 IMPAD1Q9NX62 359 aa19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 TMEM129A0AVI4 362 aa19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 ERCC1P07992 297 aaPredicted RBP19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 NUDT6P53370 316 aa19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 KLF3P57682 345 aaPredicted RBP19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 ELF3P78545 371 aaPredicted RBP19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 EIF2B1Q14232 305 aaKnown RBP19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 TAF13Q15543 124 aa19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 TRIP10Q15642 601 aa19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 MEPCEQ7L2J0 689 aaKnown RBP19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 DPY19L4Q7Z388 723 aa19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 GID4Q8IVV7 300 aa19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 ZNF454Q8N9F8 522 aa19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 OR5L1Q8NGL2 311 aa19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 TRUB1Q8WWH5 349 aaKnown RBP19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 SLC7A6Q92536 515 aa19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 HRASLS5Q96KN8 279 aa19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 SYT3Q9BQG1 590 aa19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 TOR3AQ9H497 397 aa19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 DCLRE1BQ9H816 532 aa19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 DYNLRB1Q9NP97 96 aa19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 PNRC2Q9NPJ4 139 aaKnown RBP19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 SLCO1C1Q9NYB5 712 aa19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 FZR1Q9UM11 496 aa19.85■□□□□ 0.77
SMARCB1-205ENST00000417137 PLCE1Q9P212 2302 aa19.84■□□□□ 0.77
SMARCB1-205ENST00000417137 SLC22A31A6NKX4 558 aa19.84■□□□□ 0.77
SMARCB1-205ENST00000417137 F5H5K5 113 aa19.84■□□□□ 0.77
SMARCB1-205ENST00000417137 H3BSA7 217 aa19.84■□□□□ 0.77
SMARCB1-205ENST00000417137 NGFP01138 241 aa19.84■□□□□ 0.77
SMARCB1-205ENST00000417137 DBHP09172 617 aa19.84■□□□□ 0.77
SMARCB1-205ENST00000417137 SLC15A1P46059 708 aa19.84■□□□□ 0.77
SMARCB1-205ENST00000417137 PPOXP50336 477 aa19.84■□□□□ 0.77
SMARCB1-205ENST00000417137 TPTEP56180 551 aa19.84■□□□□ 0.77
SMARCB1-205ENST00000417137 AADACL4Q5VUY2 407 aa19.84■□□□□ 0.77
SMARCB1-205ENST00000417137 SPNS3Q6ZMD2 512 aa19.84■□□□□ 0.77
SMARCB1-205ENST00000417137 SLAMF6Q96DU3 332 aa19.84■□□□□ 0.77
SMARCB1-205ENST00000417137 VRK1Q99986 396 aaPredicted RBP19.84■□□□□ 0.77
SMARCB1-205ENST00000417137 MS4A5Q9H3V2 200 aa19.84■□□□□ 0.77
SMARCB1-205ENST00000417137 CENPMQ9NSP4 180 aa19.84■□□□□ 0.77
SMARCB1-205ENST00000417137 DDX28Q9NUL7 540 aaKnown RBP19.84■□□□□ 0.77
SMARCB1-205ENST00000417137 C2CD3Q4AC94 2353 aa19.84■□□□□ 0.77
SMARCB1-205ENST00000417137 CSMD2Q7Z408 3487 aa19.83■□□□□ 0.77
SMARCB1-205ENST00000417137 A0A1W2PPW3 197 aa19.83■□□□□ 0.77
SMARCB1-205ENST00000417137 ERVS71-1P61550 626 aa19.83■□□□□ 0.77
SMARCB1-205ENST00000417137 MSMPQ1L6U9 139 aa19.83■□□□□ 0.77
SMARCB1-205ENST00000417137 KRTAP27-1Q3LI81 207 aa19.83■□□□□ 0.77
SMARCB1-205ENST00000417137 MBNL2Q5VZF2 373 aaKnown RBP19.83■□□□□ 0.77
SMARCB1-205ENST00000417137 RFPL4BQ6ZWI9 263 aa19.83■□□□□ 0.77
SMARCB1-205ENST00000417137 RHOUQ7L0Q8 258 aa19.83■□□□□ 0.77
SMARCB1-205ENST00000417137 FAM81AQ8TBF8 368 aa19.83■□□□□ 0.77
SMARCB1-205ENST00000417137 SLC25A40Q8TBP6 338 aa19.83■□□□□ 0.77
SMARCB1-205ENST00000417137 APOBEC3DQ96AK3 386 aaPredicted RBP19.83■□□□□ 0.77
SMARCB1-205ENST00000417137 MARS2Q96GW9 593 aaKnown RBP19.83■□□□□ 0.77
SMARCB1-205ENST00000417137 RDH12Q96NR8 316 aa19.83■□□□□ 0.77
SMARCB1-205ENST00000417137 COPS4Q9BT78 406 aa19.83■□□□□ 0.77
SMARCB1-205ENST00000417137 OR2J1Q9GZK6 312 aa19.83■□□□□ 0.77
SMARCB1-205ENST00000417137 RAB1BQ9H0U4 201 aa19.83■□□□□ 0.77
SMARCB1-205ENST00000417137 IGLV3-9A0A075B6K5 115 aa19.82■□□□□ 0.76
SMARCB1-205ENST00000417137 ZNF878C9JN71 531 aa19.82■□□□□ 0.76
SMARCB1-205ENST00000417137 M0R129 80 aa19.82■□□□□ 0.76
SMARCB1-205ENST00000417137 M0R233 179 aa19.82■□□□□ 0.76
SMARCB1-205ENST00000417137 GRB2P62993 217 aaKnown RBP19.82■□□□□ 0.76
SMARCB1-205ENST00000417137 RSPO1Q2MKA7 263 aaPredicted RBP19.82■□□□□ 0.76
SMARCB1-205ENST00000417137 Q5PR19 223 aa19.82■□□□□ 0.76
SMARCB1-205ENST00000417137 SPATA46Q5T0L3 261 aa19.82■□□□□ 0.76
SMARCB1-205ENST00000417137 SLC16A9Q7RTY1 509 aa19.82■□□□□ 0.76
SMARCB1-205ENST00000417137 LRP11Q86VZ4 500 aa19.82■□□□□ 0.76
SMARCB1-205ENST00000417137 PACRGLQ8N7B6 248 aa19.82■□□□□ 0.76
SMARCB1-205ENST00000417137 OR10S1Q8NGN2 331 aa19.82■□□□□ 0.76
SMARCB1-205ENST00000417137 OTOSQ8NHW6 89 aa19.82■□□□□ 0.76
SMARCB1-205ENST00000417137 KLF14Q8TD94 323 aaPredicted RBP19.82■□□□□ 0.76
SMARCB1-205ENST00000417137 ST7LQ8TDW4 575 aa19.82■□□□□ 0.76
SMARCB1-205ENST00000417137 YIPF3Q9GZM5 350 aa19.82■□□□□ 0.76
SMARCB1-205ENST00000417137 GMPPBQ9Y5P6 360 aa19.82■□□□□ 0.76
SMARCB1-205ENST00000417137 CCDC182A6NF36 153 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 SELENOFO60613 162 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 IGHV3-13P01766 116 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 MT-ND5P03915 603 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 LYNP07948 512 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 ADRA2AP08913 450 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 ACSM4P0C7M7 580 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 PSKH1P11801 424 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 NAA10P41227 235 aaPredicted RBP19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 EFNA4P52798 201 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 NKPD1Q17RQ9 610 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 LRRC36Q1X8D7 754 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 BCDIN3DQ7Z5W3 292 aaKnown RBP19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 GALNT4Q8N4A0 578 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 ZNF555Q8NEP9 628 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 THEM6Q8WUY1 208 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 SNX33Q8WV41 574 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 RFKQ969G6 155 aa19.81■□□□□ 0.76
SMARCB1-205ENST00000417137 MBOAT4Q96T53 435 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms