RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 PTTG3PQ9NZH4 202 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 VSX1Q9NZR4 365 aaPredicted RBP12.43□□□□□ -0.42
RPS28-201ENST00000417088 ARMCX1Q9P291 453 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 OR5V1Q9UGF6 321 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 ATPIF1Q9UII2 106 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 SIGLEC7Q9Y286 467 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 LRCH1Q9Y2L9 728 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 RER1O15258 196 aa12.42□□□□□ -0.42
RPS28-201ENST00000417088 NDUFB2O95178 105 aa12.42□□□□□ -0.42
RPS28-201ENST00000417088 SDHAP31040 664 aa12.42□□□□□ -0.42
RPS28-201ENST00000417088 RGS6P49758 472 aa12.42□□□□□ -0.42
RPS28-201ENST00000417088 KCNMB1Q16558 191 aa12.42□□□□□ -0.42
RPS28-201ENST00000417088 GPR139Q6DWJ6 353 aa12.42□□□□□ -0.42
RPS28-201ENST00000417088 OR2T2Q6IF00 324 aa12.42□□□□□ -0.42
RPS28-201ENST00000417088 SLC27A4Q6P1M0 643 aa12.42□□□□□ -0.42
RPS28-201ENST00000417088 MUC20Q8N307 709 aaPredicted RBP12.42□□□□□ -0.42
RPS28-201ENST00000417088 OR8G5Q8NG78 346 aa12.42□□□□□ -0.42
RPS28-201ENST00000417088 OR10AD1Q8NGE0 317 aa12.42□□□□□ -0.42
RPS28-201ENST00000417088 ZNF420Q8TAQ5 688 aaPredicted RBP12.42□□□□□ -0.42
RPS28-201ENST00000417088 FAM46AQ96IP4 442 aaKnown RBP12.42□□□□□ -0.42
RPS28-201ENST00000417088 MEGF10Q96KG7 1140 aa12.42□□□□□ -0.42
RPS28-201ENST00000417088 NDEL1Q9GZM8 345 aa12.42□□□□□ -0.42
RPS28-201ENST00000417088 MS4A7Q9GZW8 240 aaPredicted RBP12.42□□□□□ -0.42
RPS28-201ENST00000417088 NUAK2Q9H093 628 aa12.42□□□□□ -0.42
RPS28-201ENST00000417088 TMEM5Q9Y2B1 443 aa12.42□□□□□ -0.42
RPS28-201ENST00000417088 ENPP4Q9Y6X5 453 aa12.42□□□□□ -0.42
RPS28-201ENST00000417088 IGHV3OR16-10A0A075B7F0 116 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 H0YL77 283 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 NME4O00746 187 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 GSTA4O15217 222 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 SLC22A2O15244 555 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 SASH3O75995 380 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 ZNF205O95201 554 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 CYB5R3P00387 301 aaPredicted RBP12.41□□□□□ -0.42
RPS28-201ENST00000417088 SERPINA1P01009 418 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 RNASE1P07998 156 aaKnown RBP12.41□□□□□ -0.42
RPS28-201ENST00000417088 IGHV4-38-2P0DP08 117 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 H2AFXP16104 143 aaPredicted RBP12.41□□□□□ -0.42
RPS28-201ENST00000417088 CPT2P23786 658 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 HIST1H3AP68431 136 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 SLC9A3R2Q15599 337 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 HIST2H3PS2Q5TEC6 136 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 PTCHD4Q6ZW05 846 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 HIST2H3AQ71DI3 136 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 CYP4Z1Q86W10 505 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 OR52E2Q8NGJ4 325 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 OR13G1Q8NGZ3 307 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 RP9Q8TA86 221 aaKnown RBP12.41□□□□□ -0.42
RPS28-201ENST00000417088 DACT3Q96B18 629 aaPredicted RBP12.41□□□□□ -0.42
RPS28-201ENST00000417088 GPX7Q96SL4 187 aaPredicted RBP12.41□□□□□ -0.42
RPS28-201ENST00000417088 SSBP3Q9BWW4 388 aaPredicted RBP12.41□□□□□ -0.42
RPS28-201ENST00000417088 IL20RAQ9UHF4 553 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 IER3IP1Q9Y5U9 82 aa12.41□□□□□ -0.42
RPS28-201ENST00000417088 SOX21Q9Y651 276 aaPredicted RBP12.41□□□□□ -0.42
RPS28-201ENST00000417088 IGHV3-64DA0A0J9YX35 117 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 A0A1W2PRQ8 180 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 CLDN34H7C241 214 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 SOCS2O14508 198 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 MLNRO43193 412 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 GPANK1O95872 356 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 H1F0P07305 194 aaKnown RBP12.4□□□□□ -0.42
RPS28-201ENST00000417088 PPIAL4GP0DN37 164 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 RPS2P15880 293 aaKnown RBP12.4□□□□□ -0.42
RPS28-201ENST00000417088 CDKN2AP42771 156 aaKnown RBP12.4□□□□□ -0.42
RPS28-201ENST00000417088 OMPP47874 163 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 SRP9P49458 86 aaKnown RBP12.4□□□□□ -0.42
RPS28-201ENST00000417088 GSK3BP49841 420 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 SLC7A2P52569 658 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 FXYD6P3P58550 94 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 DGCR6Q14129 220 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 RSPO1Q2MKA7 263 aaPredicted RBP12.4□□□□□ -0.42
RPS28-201ENST00000417088 C8orf82Q6P1X6 216 aaPredicted RBP12.4□□□□□ -0.42
RPS28-201ENST00000417088 LRRN1Q6UXK5 716 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 C9orf139Q6ZV77 190 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 ADCK1Q86TW2 530 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 JAZF1Q86VZ6 243 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 KLBQ86Z14 1044 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 PARP8Q8N3A8 854 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 OR5L1Q8NGL2 311 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 RAB40AQ8WXH6 277 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 TAF15Q92804 592 aaKnown RBP eCLIP12.4□□□□□ -0.42
RPS28-201ENST00000417088 SLC25A28Q96A46 364 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 APOBEC3DQ96AK3 386 aaPredicted RBP12.4□□□□□ -0.42
RPS28-201ENST00000417088 UPRTQ96BW1 309 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 ZNF582Q96NG8 517 aaPredicted RBP12.4□□□□□ -0.42
RPS28-201ENST00000417088 TSSK2Q96PF2 358 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 SLC30A2Q9BRI3 323 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 TMEM246Q9BRR3 403 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 UNKLQ9H9P5 680 aaKnown RBP12.4□□□□□ -0.42
RPS28-201ENST00000417088 MIOXQ9UGB7 285 aa12.4□□□□□ -0.42
RPS28-201ENST00000417088 IGHV2-70DA0A0C4DH43 119 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 IQCF6A8MYZ5 107 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 F5H5P2 479 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 DCTN6O00399 190 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 TXNDC12O95881 172 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 PLATP00750 562 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 COX4I1P13073 169 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 NCK1P16333 377 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 PMELP40967 661 aa12.39□□□□□ -0.43
RPS28-201ENST00000417088 MTNR1AP48039 350 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms