RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 FPR3P25089 353 aa14.86□□□□□ -0.03
PDLIM2-208ENST00000416159 LEG1Q6P5S2 330 aa14.86□□□□□ -0.03
PDLIM2-208ENST00000416159 C1QL2Q7Z5L3 287 aa14.86□□□□□ -0.03
PDLIM2-208ENST00000416159 ZNF283Q8N7M2 679 aa14.86□□□□□ -0.03
PDLIM2-208ENST00000416159 ITLN1Q8WWA0 313 aa14.86□□□□□ -0.03
PDLIM2-208ENST00000416159 TSSK2Q96PF2 358 aa14.86□□□□□ -0.03
PDLIM2-208ENST00000416159 COQ7Q99807 217 aa14.86□□□□□ -0.03
PDLIM2-208ENST00000416159 HDHD2Q9H0R4 259 aa14.86□□□□□ -0.03
PDLIM2-208ENST00000416159 SRA1Q9HD15 236 aaKnown RBP14.86□□□□□ -0.03
PDLIM2-208ENST00000416159 TMCC3Q9ULS5 477 aa14.86□□□□□ -0.03
PDLIM2-208ENST00000416159 PCDHB10Q9UN67 800 aa14.86□□□□□ -0.03
PDLIM2-208ENST00000416159 LOC105371242A0A075B767 164 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 IGLV1-36A0A0B4J1U3 117 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 DCTN6O00399 190 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 IDH3BO43837 385 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 FOXH1O75593 365 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 DBHP09172 617 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 EPHA1P21709 976 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 SLC36A3Q495N2 470 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 SPATS1Q496A3 300 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 SLC27A4Q6P1M0 643 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 C16orf89Q6UX73 402 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 FBXW12Q6X9E4 464 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 USP43Q70EL4 1123 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 OR6V1Q8N148 313 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 SPICQ8N5J4 248 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 OR4K13Q8NH42 304 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 NANPQ8TBE9 248 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 GNPDA2Q8TDQ7 276 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 APOBEC3DQ96AK3 386 aaPredicted RBP14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 NMNAT3Q96T66 252 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 IFT27Q9BW83 186 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 C7orf69Q9H7B7 122 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 IL1RAPQ9NPH3 570 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 NDE1Q9NXR1 346 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 PTTG3PQ9NZH4 202 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 ARL2BPQ9Y2Y0 163 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 LHFPL6Q9Y693 200 aa14.85□□□□□ -0.03
PDLIM2-208ENST00000416159 PPIAL4EA0A075B759 164 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 PPIAL4CA0A0B4J2A2 164 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 PPIAL4DF5H284 164 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 IFNL4K9M1U5 179 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 HAX1O00165 279 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 ARPC2O15144 300 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 GPANK1O95872 356 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 PPIAL4FP0DN26 164 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 HIST1H1CP16403 213 aaKnown RBP14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 NOS3P29474 1203 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 RRM2P31350 389 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 MSX2P35548 267 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 GSSP48637 474 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 COX10Q12887 443 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 MEP1BQ16820 701 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 TMEM155Q4W5P6 130 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 ZNF771Q7L3S4 317 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 LRRC28Q86X40 367 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 KLHL36Q8N4N3 616 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 ATG16L2Q8NAA4 619 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 SEMA6DQ8NFY4 1073 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 SLC26A10Q8NG04 563 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 OR8G5Q8NG78 346 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 PATZ1Q9HBE1 687 aaKnown RBP14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 ARL8BQ9NVJ2 186 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 DCAF16Q9NXF7 216 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 PPP1R3CQ9UQK1 317 aa14.84□□□□□ -0.03
PDLIM2-208ENST00000416159 DCTN3O75935 186 aa14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 ERFP50548 548 aa14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 GNGT1P63211 74 aa14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 LCN2P80188 198 aa14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 TSPAN31Q12999 210 aa14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 HLXQ14774 488 aaPredicted RBP14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 OR2T2Q6IF00 324 aa14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 CORO6Q6QEF8 472 aa14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 ZBTB46Q86UZ6 589 aa14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 ZDHHC21Q8IVQ6 265 aa14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 DEFB107AQ8IZN7 70 aa14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 OR5AS1Q8N127 324 aa14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 OR2AJ1Q8NGZ0 328 aa14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 OR13G1Q8NGZ3 307 aa14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 ZNF582Q96NG8 517 aaPredicted RBP14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 OR2V2Q96R30 315 aa14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 JMJD8Q96S16 334 aa14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 CDADC1Q9BWV3 514 aa14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 RPRD1BQ9NQG5 326 aaKnown RBP14.83□□□□□ -0.04
PDLIM2-208ENST00000416159 KRT36O76013 467 aa14.82□□□□□ -0.04
PDLIM2-208ENST00000416159 HILS1P60008 231 aa14.82□□□□□ -0.04
PDLIM2-208ENST00000416159 BTG1P62324 171 aa14.82□□□□□ -0.04
PDLIM2-208ENST00000416159 MXRA7P84157 204 aa14.82□□□□□ -0.04
PDLIM2-208ENST00000416159 ECH1Q13011 328 aa14.82□□□□□ -0.04
PDLIM2-208ENST00000416159 COLCA1Q6ZS62 124 aa14.82□□□□□ -0.04
PDLIM2-208ENST00000416159 PIGWQ7Z7B1 504 aa14.82□□□□□ -0.04
PDLIM2-208ENST00000416159 SIGLEC11Q96RL6 698 aa14.82□□□□□ -0.04
PDLIM2-208ENST00000416159 SUCNR1Q9BXA5 334 aa14.82□□□□□ -0.04
PDLIM2-208ENST00000416159 POLR3KQ9Y2Y1 108 aaPredicted RBP14.82□□□□□ -0.04
PDLIM2-208ENST00000416159 OR6C68A6NDL8 312 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 IQCF6A8MYZ5 107 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 TMEM178BH3BS89 294 aa14.81□□□□□ -0.04
PDLIM2-208ENST00000416159 TRIM77I1YAP6 450 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms