RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 SNX32Q86XE0 403 aa3.89□□□□□ -1.79
CSTF1-202ENST00000415828 EIF1ADQ8N9N8 165 aaKnown RBP3.89□□□□□ -1.79
CSTF1-202ENST00000415828 OR4L1Q8NH43 312 aa3.89□□□□□ -1.79
CSTF1-202ENST00000415828 NT5CQ8TCD5 201 aa3.89□□□□□ -1.79
CSTF1-202ENST00000415828 RNF128Q8TEB7 428 aa3.89□□□□□ -1.79
CSTF1-202ENST00000415828 EXT2Q93063 718 aa3.89□□□□□ -1.79
CSTF1-202ENST00000415828 ADIPOR1Q96A54 375 aa3.89□□□□□ -1.79
CSTF1-202ENST00000415828 UPRTQ96BW1 309 aa3.89□□□□□ -1.79
CSTF1-202ENST00000415828 SGK494Q96LW2 274 aa3.89□□□□□ -1.79
CSTF1-202ENST00000415828 PPP1R2P1Q96PQ5 205 aa3.89□□□□□ -1.79
CSTF1-202ENST00000415828 KATNB1Q9BVA0 655 aa3.89□□□□□ -1.79
CSTF1-202ENST00000415828 TMBIM4Q9HC24 238 aa3.89□□□□□ -1.79
CSTF1-202ENST00000415828 A4GALTQ9NPC4 353 aa3.89□□□□□ -1.79
CSTF1-202ENST00000415828 DNAJB9Q9UBS3 223 aa3.89□□□□□ -1.79
CSTF1-202ENST00000415828 FBXO5Q9UKT4 447 aa3.89□□□□□ -1.79
CSTF1-202ENST00000415828 WIPI2Q9Y4P8 454 aa3.89□□□□□ -1.79
CSTF1-202ENST00000415828 CACNG2Q9Y698 323 aa3.89□□□□□ -1.79
CSTF1-202ENST00000415828 AGRNO00468 2067 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 A0A0J9YW62 118 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 C2orf92A0A1B0GVN3 265 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 ANXA2P2A6NMY6 339 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 IGLV1-44P01699 117 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 OR2T7P0C7T2 308 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 ALDH3B1P43353 468 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 LIM2P55344 173 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 SKP1P63208 163 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 ACVR1Q04771 509 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 MAD2L1BPQ15013 274 aaPredicted RBP3.88□□□□□ -1.79
CSTF1-202ENST00000415828 GABRA6Q16445 453 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 KLHL38Q2WGJ6 581 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 C18orf21Q32NC0 220 aaPredicted RBP3.88□□□□□ -1.79
CSTF1-202ENST00000415828 ZFP69Q49AA0 526 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 PTRHD1Q6GMV3 140 aaKnown RBP3.88□□□□□ -1.79
CSTF1-202ENST00000415828 GDPGP1Q6ZNW5 385 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 SLC16A9Q7RTY1 509 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 CPNE9Q8IYJ1 553 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 TMCO5AQ8N6Q1 288 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 ANKRD49Q8WVL7 239 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 FAM162AQ96A26 154 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 SPSB1Q96BD6 273 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 LRRC39Q96DD0 335 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 VPS39Q96JC1 886 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 FAM71F1Q96KD3 344 aaPredicted RBP3.88□□□□□ -1.79
CSTF1-202ENST00000415828 PKNOX2Q96KN3 472 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 GPR21Q99679 349 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 RBBP8Q99708 897 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 EGFL8Q99944 293 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 PAIP2Q9BPZ3 127 aaKnown RBP3.88□□□□□ -1.79
CSTF1-202ENST00000415828 TM2D3Q9BRN9 247 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 TBCDQ9BTW9 1192 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 SRXN1Q9BYN0 137 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 DSN1Q9H410 356 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 COPS7BQ9H9Q2 264 aaPredicted RBP3.88□□□□□ -1.79
CSTF1-202ENST00000415828 UBAP1Q9NZ09 502 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 TXNDC16Q9P2K2 825 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 PSMC3IPQ9P2W1 217 aaPredicted RBP3.88□□□□□ -1.79
CSTF1-202ENST00000415828 MCTS1Q9ULC4 181 aaKnown RBP3.88□□□□□ -1.79
CSTF1-202ENST00000415828 USH1CQ9Y6N9 552 aa3.88□□□□□ -1.79
CSTF1-202ENST00000415828 PKHD1L1Q86WI1 4243 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 IGKV3D-15A0A087WSY6 115 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 IQANK1A0A1B0GTG1 560 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 CIB4A0PJX0 185 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 MAGEB16A2A368 324 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 PRR32B1ATL7 298 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 AP3B1O00203 1094 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 NR5A2O00482 541 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 CDK2AP2O75956 126 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 SYNGR4O95473 234 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 DUS4LO95620 317 aaKnown RBP3.87□□□□□ -1.79
CSTF1-202ENST00000415828 IGHMP01871 453 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 SNRPAP09012 282 aaKnown RBP3.87□□□□□ -1.79
CSTF1-202ENST00000415828 GSTA2P09210 222 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 FRMD6-AS1P0C7T7 363 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 NPR2P20594 1047 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 EEF1B2P24534 225 aaKnown RBP3.87□□□□□ -1.79
CSTF1-202ENST00000415828 IMPA1P29218 277 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 MAGEB1P43366 347 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 MAPK12P53778 367 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 DSCR4P56555 118 aaPredicted RBP3.87□□□□□ -1.79
CSTF1-202ENST00000415828 TBPL1P62380 186 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 RPP38P78345 283 aaKnown RBP3.87□□□□□ -1.79
CSTF1-202ENST00000415828 ITIH4Q14624 930 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 TMEM187Q14656 261 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 ARHGAP19Q14CB8 494 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 TAF13Q15543 124 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 ACSBG2Q5FVE4 666 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 C9orf135Q5VTT2 229 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 MBOAT1Q6ZNC8 495 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 TMPRSS11FQ6ZWK6 438 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 RPS27LQ71UM5 84 aaKnown RBP3.87□□□□□ -1.79
CSTF1-202ENST00000415828 CCDC91Q7Z6B0 441 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 MYPOPQ86VE0 399 aaPredicted RBP3.87□□□□□ -1.79
CSTF1-202ENST00000415828 LRRC6Q86X45 466 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 FAM219AQ8IW50 185 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 MOSPD2Q8NHP6 518 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.87□□□□□ -1.79
CSTF1-202ENST00000415828 CDKL2Q92772 493 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 TLCD1Q96CP7 247 aa3.87□□□□□ -1.79
CSTF1-202ENST00000415828 GIMAP5Q96F15 307 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms