RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 ZNF91Q05481 1191 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 SMARCD3Q6STE5 483 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 MYPOPQ86VE0 399 aaPredicted RBP17.66■□□□□ 0.42
PTPRU-203ENST00000415600 OR13C2Q8NGS9 318 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 ZNF582Q96NG8 517 aaPredicted RBP17.66■□□□□ 0.42
PTPRU-203ENST00000415600 FOXN4Q96NZ1 517 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 MDFIQ99750 246 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 CDCA4Q9BXL8 241 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 MS4A5Q9H3V2 200 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 SLC22A23A1A5C7 686 aa17.65■□□□□ 0.42
PTPRU-203ENST00000415600 M0R233 179 aa17.65■□□□□ 0.42
PTPRU-203ENST00000415600 SYNGR3O43761 229 aa17.65■□□□□ 0.42
PTPRU-203ENST00000415600 LMX1BO60663 402 aa17.65■□□□□ 0.42
PTPRU-203ENST00000415600 TRMUO75648 421 aaKnown RBP17.65■□□□□ 0.42
PTPRU-203ENST00000415600 ASAH2BP0C7U1 165 aa17.65■□□□□ 0.42
PTPRU-203ENST00000415600 SELENOVP59797 346 aa17.65■□□□□ 0.42
PTPRU-203ENST00000415600 SLC36A2Q495M3 483 aa17.65■□□□□ 0.42
PTPRU-203ENST00000415600 NRN1LQ496H8 165 aa17.65■□□□□ 0.42
PTPRU-203ENST00000415600 TMEM53Q6P2H8 277 aa17.65■□□□□ 0.42
PTPRU-203ENST00000415600 SLC22A24Q8N4F4 322 aa17.65■□□□□ 0.42
PTPRU-203ENST00000415600 MRPL24Q96A35 216 aaKnown RBP17.65■□□□□ 0.42
PTPRU-203ENST00000415600 C12orf43Q96C57 262 aaKnown RBP17.65■□□□□ 0.42
PTPRU-203ENST00000415600 SGTBQ96EQ0 304 aa17.65■□□□□ 0.42
PTPRU-203ENST00000415600 LOC100289279A0A1B0GTE1 492 aa17.64■□□□□ 0.41
PTPRU-203ENST00000415600 SNTNA6NMZ2 147 aa17.64■□□□□ 0.41
PTPRU-203ENST00000415600 BHLHE40O14503 412 aa17.64■□□□□ 0.41
PTPRU-203ENST00000415600 PRODHO43272 600 aa17.64■□□□□ 0.41
PTPRU-203ENST00000415600 ZNF16P17020 682 aaPredicted RBP17.64■□□□□ 0.41
PTPRU-203ENST00000415600 SLC9A3P48764 834 aa17.64■□□□□ 0.41
PTPRU-203ENST00000415600 BCDIN3DQ7Z5W3 292 aaKnown RBP17.64■□□□□ 0.41
PTPRU-203ENST00000415600 OAFQ86UD1 273 aa17.64■□□□□ 0.41
PTPRU-203ENST00000415600 LNX2Q8N448 690 aa17.64■□□□□ 0.41
PTPRU-203ENST00000415600 UBASH3BQ8TF42 649 aa17.64■□□□□ 0.41
PTPRU-203ENST00000415600 PLEKHA8Q96JA3 519 aa17.64■□□□□ 0.41
PTPRU-203ENST00000415600 KCNN2Q9H2S1 579 aa17.64■□□□□ 0.41
PTPRU-203ENST00000415600 RNF121Q9H920 327 aa17.64■□□□□ 0.41
PTPRU-203ENST00000415600 WARS2Q9UGM6 360 aaKnown RBP17.64■□□□□ 0.41
PTPRU-203ENST00000415600 GPR160Q9UJ42 338 aa17.64■□□□□ 0.41
PTPRU-203ENST00000415600 ZNF346Q9UL40 294 aaKnown RBP17.64■□□□□ 0.41
PTPRU-203ENST00000415600 BAIAP2Q9UQB8 552 aa17.64■□□□□ 0.41
PTPRU-203ENST00000415600 DHHO43323 396 aa17.63■□□□□ 0.41
PTPRU-203ENST00000415600 NOL3O60936 208 aaKnown RBP17.63■□□□□ 0.41
PTPRU-203ENST00000415600 SERPINA5P05154 406 aa17.63■□□□□ 0.41
PTPRU-203ENST00000415600 ADRA2AP08913 450 aa17.63■□□□□ 0.41
PTPRU-203ENST00000415600 ZNF35P13682 527 aa17.63■□□□□ 0.41
PTPRU-203ENST00000415600 GIFP27352 417 aa17.63■□□□□ 0.41
PTPRU-203ENST00000415600 PLP2Q04941 152 aa17.63■□□□□ 0.41
PTPRU-203ENST00000415600 LRRC17Q8N6Y2 441 aa17.63■□□□□ 0.41
PTPRU-203ENST00000415600 OR1J2Q8NGS2 313 aa17.63■□□□□ 0.41
PTPRU-203ENST00000415600 RAB2BQ8WUD1 216 aa17.63■□□□□ 0.41
PTPRU-203ENST00000415600 TMEM158Q8WZ71 300 aa17.63■□□□□ 0.41
PTPRU-203ENST00000415600 MS4A3Q96HJ5 214 aa17.63■□□□□ 0.41
PTPRU-203ENST00000415600 BPESC1Q9GZL8 116 aa17.63■□□□□ 0.41
PTPRU-203ENST00000415600 NAA50Q9GZZ1 169 aaKnown RBP17.63■□□□□ 0.41
PTPRU-203ENST00000415600 FN3KQ9H479 309 aa17.63■□□□□ 0.41
PTPRU-203ENST00000415600 MRPS18AQ9NVS2 196 aaKnown RBP17.63■□□□□ 0.41
PTPRU-203ENST00000415600 TMEM38BQ9NVV0 291 aa17.63■□□□□ 0.41
PTPRU-203ENST00000415600 IL20RAQ9UHF4 553 aa17.63■□□□□ 0.41
PTPRU-203ENST00000415600 H3BMQ9 156 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 LCKP06239 509 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 QDPRP09417 244 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 PGA4P0DJD7 388 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 PGA3P0DJD8 388 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 PSMB9P28065 219 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 FHL1Q13642 323 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 MELKQ14680 651 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 RNLSQ5VYX0 342 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 THSD4Q6ZMP0 1018 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 TMEM80Q96HE8 168 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 COG8Q96MW5 612 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 MYCBPQ99417 103 aaPredicted RBP17.62■□□□□ 0.41
PTPRU-203ENST00000415600 FUNDC2Q9BWH2 189 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 INIPQ9NRY2 104 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 TRAV27A0A087WT01 109 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 IQCMA0A1B0GVH7 501 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 IRGMA1A4Y4 181 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 OR7A10O76100 309 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 RPL18Q07020 188 aaKnown RBP17.62■□□□□ 0.41
PTPRU-203ENST00000415600 SLC16A14Q7RTX9 510 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 ANKRD13BQ86YJ7 626 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 SKA3Q8IX90 412 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 OR51A7Q8NH64 312 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 LIPHQ8WWY8 451 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 HPS1Q92902 700 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 YIPF6Q96EC8 236 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 CDH20Q9HBT6 801 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 ENPP5Q9UJA9 477 aa17.62■□□□□ 0.41
PTPRU-203ENST00000415600 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.62■□□□□ 0.41
PTPRU-203ENST00000415600 IGHV4-61A0A0C4DH41 118 aa17.61■□□□□ 0.41
PTPRU-203ENST00000415600 TMEM129A0AVI4 362 aa17.61■□□□□ 0.41
PTPRU-203ENST00000415600 RNF212BA8MTL3 300 aa17.61■□□□□ 0.41
PTPRU-203ENST00000415600 SLC6A6P31641 620 aa17.61■□□□□ 0.41
PTPRU-203ENST00000415600 KLHL22Q53GT1 634 aa17.61■□□□□ 0.41
PTPRU-203ENST00000415600 AADACL4Q5VUY2 407 aa17.61■□□□□ 0.41
PTPRU-203ENST00000415600 NXNL2Q5VZ03 156 aa17.61■□□□□ 0.41
PTPRU-203ENST00000415600 LRFN4Q6PJG9 635 aa17.61■□□□□ 0.41
PTPRU-203ENST00000415600 ERI1Q8IV48 349 aaKnown RBP17.61■□□□□ 0.41
PTPRU-203ENST00000415600 SLC30A7Q8NEW0 376 aa17.61■□□□□ 0.41
PTPRU-203ENST00000415600 NOXO1Q8NFA2 376 aa17.61■□□□□ 0.41
PTPRU-203ENST00000415600 RFKQ969G6 155 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms