RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 SLC25A42Q86VD7 318 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 TMEM17Q86X19 198 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 FAM219AQ8IW50 185 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 ZNF248Q8NDW4 579 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 TMEM185AQ8NFB2 350 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 OR1S2Q8NGQ3 325 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 OR13C3Q8NGS6 347 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 AQP3Q92482 292 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 ZBTB8AQ96BR9 441 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 NUDT16L1Q9BRJ7 211 aaKnown RBP8.77□□□□□ -1.01
CD44-206ENST00000415148 NUDT9Q9BW91 350 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 TBL1XR1Q9BZK7 514 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 NKX6-2Q9C056 277 aaPredicted RBP8.77□□□□□ -1.01
CD44-206ENST00000415148 SLC7A5P2Q9GIP4 190 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 CGGBP1Q9UFW8 167 aaPredicted RBP8.77□□□□□ -1.01
CD44-206ENST00000415148 GTF2A1LQ9UNN4 478 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 GON4LQ3T8J9 2241 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 WDFY3Q8IZQ1 3526 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 OR14I1A6ND48 311 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 EIF1AYO14602 144 aaKnown RBP8.77□□□□□ -1.01
CD44-206ENST00000415148 BCL2L11O43521 198 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 NUDT14O95848 222 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 IL2RAP01589 272 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 CTLA4P16410 223 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 ZNF823P16415 610 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 EIF1AXP47813 144 aaKnown RBP8.77□□□□□ -1.01
CD44-206ENST00000415148 STARP49675 285 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 SQSTM1Q13501 440 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 EBPQ15125 230 aaKnown RBP8.77□□□□□ -1.01
CD44-206ENST00000415148 ELOCQ15369 112 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 NKPD1Q17RQ9 610 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 PAPD4Q6PIY7 484 aaKnown RBP8.77□□□□□ -1.01
CD44-206ENST00000415148 CORO6Q6QEF8 472 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 CHRDL2Q6WN34 429 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 ACOT7LQ6ZUV0 252 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 CBLN2Q8IUK8 224 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 ZNF584Q8IVC4 421 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 METTL27Q8N6F8 245 aaPredicted RBP8.77□□□□□ -1.01
CD44-206ENST00000415148 OR51A2Q8NGJ7 313 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 OR13C8Q8NGS7 320 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 DAZLQ92904 295 aaKnown RBP8.77□□□□□ -1.01
CD44-206ENST00000415148 MRGPRFQ96AM1 343 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 CMKLR1Q99788 373 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 VRK1Q99986 396 aaPredicted RBP8.77□□□□□ -1.01
CD44-206ENST00000415148 FAM117AQ9C073 453 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 G6PC2Q9NQR9 355 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 SOHLH2Q9NX45 425 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 OR52A1Q9UKL2 312 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 PLEKHA6Q9Y2H5 1048 aa8.77□□□□□ -1.01
CD44-206ENST00000415148 COL5A1P20908 1838 aaPredicted RBP8.77□□□□□ -1.01
CD44-206ENST00000415148 FREM3P0C091 2139 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 KIF26BQ2KJY2 2108 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 A0A1W2PPC4 97 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 CPED1A4D0V7 1026 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 NPIPB13A6NJU9 1138 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 OR6C76A6NM76 312 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 MPTX1A8MV57 137 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 NPIPB4C9JG80 1138 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 LMX1BO60663 402 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 RAB3AP20336 220 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 ZBTB25P24278 435 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 SLC26A5P58743 744 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 TAF13Q15543 124 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 ZNF260Q3ZCT1 412 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 UQCC3Q6UW78 93 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 LYG2Q86SG7 212 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 GKN2Q86XP6 184 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 LDLRAD3Q86YD5 345 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 CCDC36Q8IYA8 594 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 PRR22Q8IZ63 422 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 PUSL1Q8N0Z8 303 aaKnown RBP8.76□□□□□ -1.01
CD44-206ENST00000415148 GPR119Q8TDV5 335 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 SLC6A7Q99884 636 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 ESRP2Q9H6T0 727 aaKnown RBP8.76□□□□□ -1.01
CD44-206ENST00000415148 CUTCQ9NTM9 273 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 GDF2Q9UK05 429 aaPredicted RBP8.76□□□□□ -1.01
CD44-206ENST00000415148 FARSAQ9Y285 508 aaKnown RBP8.76□□□□□ -1.01
CD44-206ENST00000415148 COA3Q9Y2R0 106 aaPredicted RBP8.76□□□□□ -1.01
CD44-206ENST00000415148 RHBDD3Q9Y3P4 386 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 TDRD6O60522 2096 aaKnown RBP8.76□□□□□ -1.01
CD44-206ENST00000415148 CPAMD8Q8IZJ3 1885 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 IGHV5-51A0A0C4DH38 117 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 DCDC2BA2VCK2 349 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 FADS1O60427 444 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 AHSA1O95433 338 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 GP1BAP07359 652 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 TBPP20226 339 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 HSD11B1P28845 292 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 NR0B1P51843 470 aaKnown RBP8.76□□□□□ -1.01
CD44-206ENST00000415148 PPIAP62937 165 aaKnown RBP8.76□□□□□ -1.01
CD44-206ENST00000415148 PLCXD2Q0VAA5 305 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 TDGQ13569 410 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 SCGB2B2Q4G0G5 96 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 RNASE10Q5GAN6 216 aaKnown RBP8.76□□□□□ -1.01
CD44-206ENST00000415148 POMZP3Q6PJE2 187 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 UNQ6126/PRO20091Q6UXV3 157 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 DTWD2Q8NBA8 298 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 SLC26A10Q8NG04 563 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 OR5T2Q8NGG2 359 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 MITD1Q8WV92 249 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms