RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 CYSLTR2Q9NS75 346 aa12.6□□□□□ -0.39
LIMS1-206ENST00000414829 GRIP1Q9Y3R0 1128 aa12.6□□□□□ -0.39
LIMS1-206ENST00000414829 TMEM14AQ9Y6G1 99 aa12.6□□□□□ -0.39
LIMS1-206ENST00000414829 TACC2O95359 2948 aa12.6□□□□□ -0.39
LIMS1-206ENST00000414829 IGLV3-9A0A075B6K5 115 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 PLSCR5A0PG75 271 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 TVP23AA6NH52 213 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 SNTNA6NMZ2 147 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 ZNF593O00488 134 aaPredicted RBP12.59□□□□□ -0.39
LIMS1-206ENST00000414829 WNT5AP41221 380 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 POU4F2Q12837 409 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 RCN1Q15293 331 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 MST1LQ2TV78 715 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 FAM209AQ5JX71 171 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 CLEC2AQ6UVW9 174 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 RFPL4BQ6ZWI9 263 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 ZNF101Q8IZC7 436 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 PACRGLQ8N7B6 248 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 ZNF511Q8NB15 262 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 NEU4Q8WWR8 484 aaPredicted RBP12.59□□□□□ -0.39
LIMS1-206ENST00000414829 MNTQ99583 582 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 DOK1Q99704 481 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 SYT3Q9BQG1 590 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 HCAR1Q9BXC0 346 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 MRPL37Q9BZE1 423 aaKnown RBP12.59□□□□□ -0.39
LIMS1-206ENST00000414829 OR51B6Q9H340 312 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 OPA3Q9H6K4 179 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 MED20Q9H944 212 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 WDR76Q9H967 626 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 DUSP13Q9UII6 198 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 CSMD1Q96PZ7 3565 aa12.59□□□□□ -0.39
LIMS1-206ENST00000414829 TEX15Q9BXT5 2789 aa12.58□□□□□ -0.39
LIMS1-206ENST00000414829 M0R135 149 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 TLX2O43763 284 aaPredicted RBP12.58□□□□□ -0.4
LIMS1-206ENST00000414829 PRKYO43930 277 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 MPZL2O60487 215 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 IGHV3-13P01766 116 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 SLC2A5P22732 501 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 MALLQ13021 153 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 TMED1Q13445 227 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 APOFQ13790 326 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 EIF2B1Q14232 305 aaKnown RBP12.58□□□□□ -0.4
LIMS1-206ENST00000414829 GGTLC2Q14390 218 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 PCGF3Q3KNV8 242 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 KRTAP27-1Q3LI81 207 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 DRAM2Q6UX65 266 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 TGIF2LYQ8IUE0 185 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 TIGD4Q8IY51 512 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 TCEANCQ8N8B7 351 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 SLAMF6Q96DU3 332 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 ZMYND19Q96E35 227 aaPredicted RBP12.58□□□□□ -0.4
LIMS1-206ENST00000414829 ZNF799Q96GE5 643 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 HRASLS5Q96KN8 279 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 CNN2Q99439 309 aaKnown RBP12.58□□□□□ -0.4
LIMS1-206ENST00000414829 VRK1Q99986 396 aaPredicted RBP12.58□□□□□ -0.4
LIMS1-206ENST00000414829 YIPF3Q9GZM5 350 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 NIPAL2Q9H841 368 aa12.58□□□□□ -0.4
LIMS1-206ENST00000414829 HRNRQ86YZ3 2850 aaPredicted RBP12.58□□□□□ -0.4
LIMS1-206ENST00000414829 PLCE1Q9P212 2302 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 LRBAP50851 2863 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 ERICH4A6NGS2 130 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 PHYHO14832 338 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 LYNP07948 512 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 ANPEPP15144 967 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 SELEP16581 610 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 HSD11B1P28845 292 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 SLC6A9P48067 706 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 TRIP10Q15642 601 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 OTPQ5XKR4 325 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 TMEM154Q6P9G4 183 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 MEPCEQ7L2J0 689 aaKnown RBP12.57□□□□□ -0.4
LIMS1-206ENST00000414829 SLC16A9Q7RTY1 509 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 DPY19L4Q7Z388 723 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 OTOSQ8NHW6 89 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 FAM81AQ8TBF8 368 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 SLC25A40Q8TBP6 338 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 KLF14Q8TD94 323 aaPredicted RBP12.57□□□□□ -0.4
LIMS1-206ENST00000414829 RNF133Q8WVZ7 376 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 ASB17Q8WXJ9 295 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 MARS2Q96GW9 593 aaKnown RBP12.57□□□□□ -0.4
LIMS1-206ENST00000414829 MAP6Q96JE9 813 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 DIRC2Q96SL1 478 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 KCNJ15Q99712 375 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 C1QTNF5Q9BXJ0 243 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 DCLRE1BQ9H816 532 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 PNRC2Q9NPJ4 139 aaKnown RBP12.57□□□□□ -0.4
LIMS1-206ENST00000414829 HAO2Q9NYQ3 351 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 WARS2Q9UGM6 360 aaKnown RBP12.57□□□□□ -0.4
LIMS1-206ENST00000414829 LAMP5Q9UJQ1 280 aa12.57□□□□□ -0.4
LIMS1-206ENST00000414829 F5H5K5 113 aa12.56□□□□□ -0.4
LIMS1-206ENST00000414829 TIMM8AO60220 97 aaPredicted RBP12.56□□□□□ -0.4
LIMS1-206ENST00000414829 F12P00748 615 aaPredicted RBP12.56□□□□□ -0.4
LIMS1-206ENST00000414829 IGHV4-39P01824 125 aa12.56□□□□□ -0.4
LIMS1-206ENST00000414829 ACSM4P0C7M7 580 aa12.56□□□□□ -0.4
LIMS1-206ENST00000414829 RAC2P15153 192 aa12.56□□□□□ -0.4
LIMS1-206ENST00000414829 EPHA2P29317 976 aa12.56□□□□□ -0.4
LIMS1-206ENST00000414829 OTX1P32242 354 aaPredicted RBP12.56□□□□□ -0.4
LIMS1-206ENST00000414829 EFNB1P98172 346 aa12.56□□□□□ -0.4
LIMS1-206ENST00000414829 CLEC12BQ2HXU8 276 aa12.56□□□□□ -0.4
LIMS1-206ENST00000414829 AADACL4Q5VUY2 407 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms