RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 APH1BQ8WW43 257 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 RCN3Q96D15 328 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 ZNF681Q96N22 645 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 GPR21Q99679 349 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 ATF6BQ99941 703 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 ZNF426Q9BUY5 554 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 C20orf85Q9H1P6 137 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 REEP1Q9H902 201 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 C6orf50Q9HD87 102 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 RHBDL2Q9NX52 303 aa3.5□□□□□ -1.85
BRCA1-204ENST00000412061 IGHV3OR16-13A0A075B7E8 117 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 IGKV1D-13A0A0B4J2D9 117 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 NCBP2LA6PVI3 153 aaKnown RBP3.49□□□□□ -1.85
BRCA1-204ENST00000412061 C12orf77C9JDV5 145 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 H0YHG0 523 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 PLPP3O14495 311 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 CDX4O14627 284 aaPredicted RBP3.49□□□□□ -1.85
BRCA1-204ENST00000412061 TRAPPC3O43617 180 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 AIFM1O95831 613 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 SLC35E2P0CK97 266 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 IGKV1-13P0DP09 117 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 GGT1P19440 569 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 USF1P22415 310 aaPredicted RBP3.49□□□□□ -1.85
BRCA1-204ENST00000412061 NTSP30990 170 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 BTCP35070 178 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 MAS1LP35410 378 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 SERPINB5P36952 375 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 VDAC2P45880 294 aaPredicted RBP3.49□□□□□ -1.85
BRCA1-204ENST00000412061 FABP6P51161 128 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 RND2P52198 227 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 HCCSP53701 268 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 IRX1P78414 480 aaPredicted RBP3.49□□□□□ -1.85
BRCA1-204ENST00000412061 ST3GAL4Q11206 333 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 ATP6AP1Q15904 470 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 THEM4Q5T1C6 240 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 CXCL17Q6UXB2 119 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 MBOAT2Q6ZWT7 520 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 TMUB2Q71RG4 321 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 THOC6Q86W42 341 aaKnown RBP3.49□□□□□ -1.85
BRCA1-204ENST00000412061 ZNF677Q86XU0 584 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 LRRC34Q8IZ02 419 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 LRRC52Q8N7C0 313 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 CCDC71LQ8N9Z2 235 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 ATP6V1C2Q8NEY4 427 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 OR4F15Q8NGB8 312 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 OR10G3Q8NGC4 313 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 OR6T1Q8NGN1 323 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 OR2L2Q8NH16 312 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 VN1R17PQ8TDU5 208 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 NPRL2Q8WTW4 380 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 ADTRPQ96IZ2 230 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 SLC45A3Q96JT2 553 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 LINC00479Q96M42 142 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 TSNAXQ99598 290 aaKnown RBP3.49□□□□□ -1.85
BRCA1-204ENST00000412061 GABRG3Q99928 467 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 RSG1Q9BU20 258 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 RIOK2Q9BVS4 552 aaKnown RBP3.49□□□□□ -1.85
BRCA1-204ENST00000412061 ING2Q9H160 280 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 RPF2Q9H7B2 306 aaKnown RBP3.49□□□□□ -1.85
BRCA1-204ENST00000412061 ISG20L2Q9H9L3 353 aaKnown RBP3.49□□□□□ -1.85
BRCA1-204ENST00000412061 SLC39A1Q9NY26 324 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 DHRS4-AS1Q9P1J3 65 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 MDFICQ9P1T7 246 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 DPM3Q9P2X0 92 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 ST3GAL6Q9Y274 331 aa3.49□□□□□ -1.85
BRCA1-204ENST00000412061 TDRD15B5MCY1 1934 aaKnown RBP3.49□□□□□ -1.85
BRCA1-204ENST00000412061 GOLGA8IPA6NC78 632 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 GOLGA8JA6NMD2 632 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 ERI2A8K979 691 aaKnown RBP3.48□□□□□ -1.85
BRCA1-204ENST00000412061 GOLGA8KD6RF30 607 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 GOLGA8MH3BSY2 632 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 AGPAT2O15120 278 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 GATCO43716 136 aaKnown RBP3.48□□□□□ -1.85
BRCA1-204ENST00000412061 SLC16A7O60669 478 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 SRP72O76094 671 aaKnown RBP3.48□□□□□ -1.85
BRCA1-204ENST00000412061 HPRT1P00492 218 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 GOLGA8HP0CJ92 632 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 PSKH1P11801 424 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 CMA1P23946 247 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 SHC1P29353 583 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 GNRHRP30968 328 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 ARL2P36404 184 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 MAGEA2P43356 314 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 PRELPP51888 382 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 AP1S2P56377 157 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 TAS2R39P59534 338 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 DSTNP60981 165 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 MXD1Q05195 221 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 CD300CQ08708 224 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 STX4Q12846 297 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 BNIP2Q12982 314 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 FLOT2Q14254 428 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 SLC1A5Q15758 541 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 NRF1Q16656 503 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 LRRC36Q1X8D7 754 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 BSXQ3C1V8 233 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 CCNJQ5T5M9 372 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 ZC2HC1BQ5TFG8 222 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 UBE2UQ5VVX9 321 aa3.48□□□□□ -1.85
BRCA1-204ENST00000412061 FRMPD2BQ6IN97 320 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms