RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 TRBV23-1A0A0A0MS06 115 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 F2RL2O00254 374 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 RNASET2O00584 256 aaKnown RBP5.12□□□□□ -1.59
LINC00396-201ENST00000411690 PLPP3O14495 311 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 CHEK2O96017 543 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 NR2F1P10589 423 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 MYL2P10916 166 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 CHI3L1P36222 383 aaPredicted RBP5.12□□□□□ -1.59
LINC00396-201ENST00000411690 PMELP40967 661 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 PSG4Q00888 419 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 GUCY1A3Q02108 690 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 ACSM1Q08AH1 577 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 KLRD1Q13241 179 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 LIN52Q52LA3 116 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 OR4F3Q6IEY1 312 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 KCTD18Q6PI47 426 aaPredicted RBP5.12□□□□□ -1.59
LINC00396-201ENST00000411690 FRMD7Q6ZUT3 714 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 LHFPL2Q6ZUX7 228 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 SLC35D2Q76EJ3 337 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 SERPINA11Q86U17 422 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 SBSPONQ8IVN8 264 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 MRPL41Q8IXM3 137 aaKnown RBP5.12□□□□□ -1.59
LINC00396-201ENST00000411690 IFT20Q8IY31 132 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 CMTM4Q8IZR5 234 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 CLIP4Q8N3C7 705 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 NPEPL1Q8NDH3 523 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 OR11L1Q8NGX0 322 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 OR13G1Q8NGZ3 307 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 OR6S1Q8NH40 331 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 MCHR2Q969V1 340 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 ISOC1Q96CN7 298 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 HAVCR1Q96D42 359 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 SLC25A44Q96H78 314 aaPredicted RBP5.12□□□□□ -1.59
LINC00396-201ENST00000411690 PRR25Q96S07 402 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 FUT8Q9BYC5 575 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 PARD6BQ9BYG5 372 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 PRSS22Q9GZN4 317 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 MEGF9Q9H1U4 602 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 MUC13Q9H3R2 512 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 POFUT1Q9H488 388 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 TUBB1Q9H4B7 451 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 ARMC7Q9H6L4 198 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 ZMAT4Q9H898 229 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 SIAEQ9HAT2 523 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 C12orf10Q9HB07 376 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 MED4Q9NPJ6 270 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 C20orf141Q9NUB4 165 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 MRPL39Q9NYK5 338 aaKnown RBP5.12□□□□□ -1.59
LINC00396-201ENST00000411690 KLHL14Q9P2G3 628 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 MARCOQ9UEW3 520 aaPredicted RBP5.12□□□□□ -1.59
LINC00396-201ENST00000411690 ZNF180Q9UJW8 692 aa5.12□□□□□ -1.59
LINC00396-201ENST00000411690 CSMD3Q7Z407 3707 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 IGKV1D-42A0A075B6H8 117 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 A0A1B0GW55 424 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 SMIM23A6NLE4 172 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 F5H5P2 479 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 DVL1O14640 695 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 AZIN1O14977 448 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 NDUFA2O43678 99 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 SYNGR1O43759 233 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 PEX11AO75192 247 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 OR6A2O95222 327 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 CPSF4O95639 269 aaKnown RBP5.11□□□□□ -1.59
LINC00396-201ENST00000411690 ABHD16AO95870 558 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 BGLAPP02818 100 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 DUX4L2P0CJ85 424 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 DUX4L3P0CJ86 424 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 DUX4L5P0CJ88 424 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 DUX4L6P0CJ89 424 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 DUX4L7P0CJ90 424 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 PGA4P0DJD7 388 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 PGA3P0DJD8 388 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 ADORA3P0DMS8 318 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 HTR5AP47898 357 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 RGS6P49758 472 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 ERFP50548 548 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 BMXP51813 675 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 UBE2E1P51965 193 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 DLX1P56177 255 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 CLRN1P58418 232 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 ERVK-25P63136 954 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 HOXC5Q00444 222 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 MELKQ14680 651 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 OR8B8Q15620 311 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 AANATQ16613 207 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 PDCD4Q53EL6 469 aaKnown RBP5.11□□□□□ -1.59
LINC00396-201ENST00000411690 BEND6Q5SZJ8 279 aaPredicted RBP5.11□□□□□ -1.59
LINC00396-201ENST00000411690 DUX4L9Q6RFH8 374 aaPredicted RBP5.11□□□□□ -1.59
LINC00396-201ENST00000411690 RNF165Q6ZSG1 346 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 ZNF572Q7Z3I7 529 aaPredicted RBP5.11□□□□□ -1.59
LINC00396-201ENST00000411690 LCA5Q86VQ0 697 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 NUDCD3Q8IVD9 361 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 RIMKLAQ8IXN7 391 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 LRRC34Q8IZ02 419 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 C10orf53Q8N6V4 93 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 OR8G5Q8NG78 346 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 GATAD1Q8WUU5 269 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 C17orf50Q8WW18 174 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 ST8SIA4Q92187 359 aa5.11□□□□□ -1.59
LINC00396-201ENST00000411690 PTP4A1Q93096 173 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms