RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 TBPP20226 339 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 FBLP22087 321 aaKnown RBP14.91□□□□□ -0.02
LIMS2-208ENST00000410011 GPR85P60893 370 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 QRFPP83859 136 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 C14orf28Q4W4Y0 310 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 H1FNTQ75WM6 255 aaPredicted RBP14.91□□□□□ -0.02
LIMS2-208ENST00000410011 LYG2Q86SG7 212 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 STPG2Q8N412 459 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 DTWD2Q8NBA8 298 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 OR4D6Q8NGJ1 314 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 MITD1Q8WV92 249 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 DNAJA3Q96EY1 480 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 OR11A1Q9GZK7 315 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 COMMD9Q9P000 198 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 DHCR7Q9UBM7 475 aaKnown RBP14.91□□□□□ -0.02
LIMS2-208ENST00000410011 GPR160Q9UJ42 338 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 UNC80Q8N2C7 3258 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 EIF1AYO14602 144 aaKnown RBP14.91□□□□□ -0.02
LIMS2-208ENST00000410011 BPNT1O95861 308 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 HLA-DOBP13765 273 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 BDKRB2P30411 391 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 LTBRP36941 435 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 APOBEC1P41238 236 aaKnown RBP14.91□□□□□ -0.02
LIMS2-208ENST00000410011 EIF1AXP47813 144 aaKnown RBP14.91□□□□□ -0.02
LIMS2-208ENST00000410011 SUMO3P55854 103 aaPredicted RBP14.91□□□□□ -0.02
LIMS2-208ENST00000410011 KIF26BQ2KJY2 2108 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 RNASE10Q5GAN6 216 aaKnown RBP14.91□□□□□ -0.02
LIMS2-208ENST00000410011 FAM122CQ6P4D5 195 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 D2HGDHQ8N465 521 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 PAQR4Q8N4S7 273 aaPredicted RBP14.91□□□□□ -0.02
LIMS2-208ENST00000410011 ZBTB44Q8NCP5 570 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 MRPS24Q96EL2 167 aaKnown RBP14.91□□□□□ -0.02
LIMS2-208ENST00000410011 BARX1Q9HBU1 254 aaPredicted RBP14.91□□□□□ -0.02
LIMS2-208ENST00000410011 VSIG4Q9Y279 399 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 IGHV1OR15-9A0A0B4J2B8 117 aa14.9□□□□□ -0.02
LIMS2-208ENST00000410011 KANTRA0A1W2PQU2 76 aa14.9□□□□□ -0.02
LIMS2-208ENST00000410011 TMEM235A6NFC5 223 aa14.9□□□□□ -0.02
LIMS2-208ENST00000410011 ANKUB1A6NFN9 424 aa14.9□□□□□ -0.02
LIMS2-208ENST00000410011 LGALS8O00214 317 aa14.9□□□□□ -0.02
LIMS2-208ENST00000410011 TSPAN4O14817 238 aa14.9□□□□□ -0.02
LIMS2-208ENST00000410011 ZNF208O43345 1280 aa14.9□□□□□ -0.02
LIMS2-208ENST00000410011 BCL2L11O43521 198 aa14.9□□□□□ -0.02
LIMS2-208ENST00000410011 HLA-AP01891 365 aaKnown RBP14.9□□□□□ -0.02
LIMS2-208ENST00000410011 FCER2P06734 321 aa14.9□□□□□ -0.02
LIMS2-208ENST00000410011 ATF4P18848 351 aaPredicted RBP14.9□□□□□ -0.02
LIMS2-208ENST00000410011 ZNF529Q6P280 563 aa14.9□□□□□ -0.02
LIMS2-208ENST00000410011 CORO6Q6QEF8 472 aa14.9□□□□□ -0.02
LIMS2-208ENST00000410011 ACOT7LQ6ZUV0 252 aa14.9□□□□□ -0.02
LIMS2-208ENST00000410011 OR1L3Q8NH93 324 aa14.9□□□□□ -0.02
LIMS2-208ENST00000410011 FAM46BQ96A09 425 aa14.9□□□□□ -0.02
LIMS2-208ENST00000410011 AIFM2Q9BRQ8 373 aa14.9□□□□□ -0.02
LIMS2-208ENST00000410011 FAM206AQ9NX38 181 aa14.9□□□□□ -0.02
LIMS2-208ENST00000410011 ZNF230Q9UIE0 474 aaPredicted RBP14.9□□□□□ -0.02
LIMS2-208ENST00000410011 WIPF3A6NGB9 483 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 NPIPA5E9PKD4 350 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 ZNF28P17035 718 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 PPM1FP49593 454 aaPredicted RBP14.89□□□□□ -0.03
LIMS2-208ENST00000410011 CXADRP78310 365 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 Q6ZS52 159 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 SLC22A24Q8N4F4 322 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 SMRP1Q8NCR6 262 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 NKX3-1Q99801 234 aaPredicted RBP14.89□□□□□ -0.03
LIMS2-208ENST00000410011 VN1R1Q9GZP7 353 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 CNTD2Q9H8S5 307 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 C12orf4Q9NQ89 552 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 NPIPA1Q9UND3 350 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 PRELID1Q9Y255 219 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 FARSAQ9Y285 508 aaKnown RBP14.89□□□□□ -0.03
LIMS2-208ENST00000410011 NOP16Q9Y3C1 178 aaKnown RBP14.89□□□□□ -0.03
LIMS2-208ENST00000410011 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 RHPN2P1A8MT19 583 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 H2BFMP0C1H6 154 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 C17orf67Q0P5P2 114 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 FJX1Q86VR8 437 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.89□□□□□ -0.03
LIMS2-208ENST00000410011 KLHL13Q9P2N7 655 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 KNL1Q8NG31 2342 aa14.89□□□□□ -0.03
LIMS2-208ENST00000410011 C9orf170A2RU37 121 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 METTL12A8MUP2 240 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 ETV2O00321 342 aaPredicted RBP14.88□□□□□ -0.03
LIMS2-208ENST00000410011 HNRNPKP61978 463 aaKnown RBP eCLIP14.88□□□□□ -0.03
LIMS2-208ENST00000410011 SCGB2B2Q4G0G5 96 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 OR10K2Q6IF99 312 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 OR10K1Q8NGX5 313 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 MRGPRFQ96AM1 343 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 B3GNT4Q9C0J1 378 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 ZMAT3Q9HA38 289 aaKnown RBP14.88□□□□□ -0.03
LIMS2-208ENST00000410011 FBXO4Q9UKT5 387 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 PCDH15Q96QU1 1955 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 PCNX3Q9H6A9 2034 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 A0A1B0GX78 115 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 RNF222A6NCQ9 220 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 ARL4DP49703 201 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 HSF1Q00613 529 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 CDNFQ49AH0 187 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 RHOUQ7L0Q8 258 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 PLXDC1Q8IUK5 500 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 PHB2Q99623 299 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 CHST11Q9NPF2 352 aa14.88□□□□□ -0.03
LIMS2-208ENST00000410011 SLC5A6Q9Y289 635 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms