RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 YBX2Q9Y2T7 364 aaKnown RBP7.49□□□□□ -1.21
SNX13-201ENST00000409076 TMED7-TICAM2A0A0A6YYA0 188 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 A0A1B0GW55 424 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 LINC00862A6NCI5 91 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 ZNF254O75437 659 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 CSF1P09603 554 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 GIPP09681 153 aaPredicted RBP7.49□□□□□ -1.21
SNX13-201ENST00000409076 PATE4P0C8F1 98 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 DUX4L2P0CJ85 424 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 DUX4L3P0CJ86 424 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 DUX4L4P0CJ87 422 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 DUX4L5P0CJ88 424 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 DUX4L6P0CJ89 424 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 DUX4L7P0CJ90 424 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 RCC1P18754 421 aaPredicted RBP7.49□□□□□ -1.21
SNX13-201ENST00000409076 GUCA1AP43080 201 aaPredicted RBP7.49□□□□□ -1.21
SNX13-201ENST00000409076 KCNJ3P48549 501 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 DHPSP49366 369 aaPredicted RBP7.49□□□□□ -1.21
SNX13-201ENST00000409076 MNX1P50219 401 aaPredicted RBP7.49□□□□□ -1.21
SNX13-201ENST00000409076 OR2B8PP59922 312 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 SWI5Q1ZZU3 235 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 SLC25A30Q5SVS4 291 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 TSPO2Q5TGU0 170 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 ZNF660Q6AZW8 331 aaPredicted RBP7.49□□□□□ -1.21
SNX13-201ENST00000409076 NR4A3Q92570 626 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 REEP6Q96HR9 211 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 AIFM2Q9BRQ8 373 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 PDE7BQ9NP56 450 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 INPP5EQ9NRR6 644 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 DUX4Q9UBX2 424 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 KCNMB2Q9Y691 235 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 URGCP-MRPS24S4R325 110 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 FAM230AA0A1W2PPH8 454 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 METTL21EPA6NDL7 271 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 OR5K3A6NET4 321 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 OR6C76A6NM76 312 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 ANGPTL7O43827 346 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 NME2P1O60361 137 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 SRPX2O60687 465 aaPredicted RBP7.49□□□□□ -1.21
SNX13-201ENST00000409076 ZNF354AO60765 605 aaPredicted RBP7.49□□□□□ -1.21
SNX13-201ENST00000409076 MED6O75586 246 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 DIRAS3O95661 229 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 ERGP11308 486 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 IL32P24001 234 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 CD80P33681 288 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 PLXDC2Q6UX71 529 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 PXKQ7Z7A4 578 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 SLC22A18ASQ8N1D0 253 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 C17orf78Q8N4C9 275 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 OR2AJ1Q8NGZ0 328 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 OR51F2Q8NH61 342 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 NUDT9Q9BW91 350 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 NKX6-2Q9C056 277 aaPredicted RBP7.49□□□□□ -1.21
SNX13-201ENST00000409076 EIF5A2Q9GZV4 153 aaKnown RBP7.49□□□□□ -1.21
SNX13-201ENST00000409076 UPB1Q9UBR1 384 aa7.49□□□□□ -1.21
SNX13-201ENST00000409076 C3orf80F5H4A9 247 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 OGG1O15527 345 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 PLRG1O43660 514 aaKnown RBP7.48□□□□□ -1.21
SNX13-201ENST00000409076 GPRIN2O60269 458 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 PRAF2O60831 178 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 NKX2-2O95096 273 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 HOXD4P09016 255 aaPredicted RBP7.48□□□□□ -1.21
SNX13-201ENST00000409076 CTRB1P17538 263 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 MGAT2Q10469 447 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 PHLDA2Q53GA4 152 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 CTRB2Q6GPI1 263 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 KCTD18Q6PI47 426 aaPredicted RBP7.48□□□□□ -1.21
SNX13-201ENST00000409076 MAMDC2Q7Z304 686 aaPredicted RBP7.48□□□□□ -1.21
SNX13-201ENST00000409076 VASH2Q86V25 355 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 MYPOPQ86VE0 399 aaPredicted RBP7.48□□□□□ -1.21
SNX13-201ENST00000409076 CDH26Q8IXH8 852 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 HSD17B11Q8NBQ5 300 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 TMEM104Q8NE00 496 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 OR6N1Q8NGY5 312 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 PELOQ9BRX2 385 aaKnown RBP7.48□□□□□ -1.21
SNX13-201ENST00000409076 METTL7AQ9H8H3 244 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 RCL1Q9Y2P8 373 aaKnown RBP7.48□□□□□ -1.21
SNX13-201ENST00000409076 COL4A3Q01955 1670 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 IGKV1D-42A0A075B6H8 117 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 TRAV1-2A0A0B4J238 106 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 TEX51A0A1B0GUA7 166 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 A0A1W2PQF6 199 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 A0A1W2PR80 420 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 OR4C45A6NMZ5 311 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 SULT1C2O00338 296 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 GDF9O60383 454 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 TBX19O60806 448 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 WDPCPO95876 746 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 SPTA1P02549 2419 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 RAB40ALP0C0E4 278 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 CSF2RBP32927 897 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 LBX1P52954 281 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 CLRN1P58418 232 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 GLIPR1L1Q6UWM5 242 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 OR51T1Q8NGJ9 327 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 NANPQ8TBE9 248 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 SLC2A12Q8TD20 617 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 RAB40AQ8WXH6 277 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 FOXRED1Q96CU9 486 aaPredicted RBP7.48□□□□□ -1.21
SNX13-201ENST00000409076 C4orf45Q96LM5 186 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms