RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 C1orf229Q6ZS94 237 aaPredicted RBP16.31■□□□□ 0.2
SMARCB1-204ENST00000407422 RFLNBQ8N5W9 214 aa16.31■□□□□ 0.2
SMARCB1-204ENST00000407422 GJC3Q8NFK1 279 aa16.31■□□□□ 0.2
SMARCB1-204ENST00000407422 SLC26A10Q8NG04 563 aa16.31■□□□□ 0.2
SMARCB1-204ENST00000407422 GNPDA2Q8TDQ7 276 aa16.31■□□□□ 0.2
SMARCB1-204ENST00000407422 RAB39BQ96DA2 213 aa16.31■□□□□ 0.2
SMARCB1-204ENST00000407422 G6PC2Q9NQR9 355 aa16.31■□□□□ 0.2
SMARCB1-204ENST00000407422 TUBG2Q9NRH3 451 aa16.31■□□□□ 0.2
SMARCB1-204ENST00000407422 ISPDA4D126 451 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 RENP00797 406 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 AVPP01185 164 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 ANPEPP15144 967 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 NOS3P29474 1203 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 TSPAN31Q12999 210 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 RSPO1Q2MKA7 263 aaPredicted RBP16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 CLEC12AQ5QGZ9 265 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 SLC35F1Q5T1Q4 408 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 LINC00346Q8IVM7 164 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 OR5AS1Q8N127 324 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 SDR9C7Q8NEX9 313 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 OR9Q2Q8NGE9 314 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 PTP4A1Q93096 173 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 GAL3ST1Q99999 423 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 EGLN3Q9H6Z9 239 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 PTTG3PQ9NZH4 202 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 ATPIF1Q9UII2 106 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 METRNQ9UJH8 293 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 LYVE1Q9Y5Y7 322 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 B2RBV5 119 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 TCF21O43680 179 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 PNPP00491 289 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 SLC3A1Q07837 685 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 COX10Q12887 443 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 CFAP77Q6ZQR2 320 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 ZBTB46Q86UZ6 589 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 OR52E2Q8NGJ4 325 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 COG8Q96MW5 612 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 DCLRE1CQ96SD1 692 aaKnown RBP16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 CCT8L2Q96SF2 557 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 BTBD10Q9BSF8 475 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 HDHD2Q9H0R4 259 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 UBAP1Q9NZ09 502 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 ACTR3BQ9P1U1 418 aa16.3■□□□□ 0.2
SMARCB1-204ENST00000407422 RAC2P15153 192 aa16.29■□□□□ 0.2
SMARCB1-204ENST00000407422 HMGA2P52926 109 aa16.29■□□□□ 0.2
SMARCB1-204ENST00000407422 PPP1R8Q12972 351 aaKnown RBP16.29■□□□□ 0.2
SMARCB1-204ENST00000407422 LIPNQ5VXI9 398 aa16.29■□□□□ 0.2
SMARCB1-204ENST00000407422 SLC18B1Q6NT16 456 aa16.29■□□□□ 0.2
SMARCB1-204ENST00000407422 PGM2L1Q6PCE3 622 aa16.29■□□□□ 0.2
SMARCB1-204ENST00000407422 ITLN1Q8WWA0 313 aa16.29■□□□□ 0.2
SMARCB1-204ENST00000407422 COQ7Q99807 217 aa16.29■□□□□ 0.2
SMARCB1-204ENST00000407422 OCEL1Q9H607 264 aa16.29■□□□□ 0.2
SMARCB1-204ENST00000407422 LOC105371242A0A075B767 164 aa16.28■□□□□ 0.2
SMARCB1-204ENST00000407422 TCRBV5S2A0A599 114 aa16.28■□□□□ 0.2
SMARCB1-204ENST00000407422 IDH3BO43837 385 aa16.28■□□□□ 0.2
SMARCB1-204ENST00000407422 KRT36O76013 467 aa16.28■□□□□ 0.2
SMARCB1-204ENST00000407422 TNFSF4P23510 183 aa16.28■□□□□ 0.2
SMARCB1-204ENST00000407422 RGS6P49758 472 aa16.28■□□□□ 0.2
SMARCB1-204ENST00000407422 MNAT1P51948 309 aa16.28■□□□□ 0.2
SMARCB1-204ENST00000407422 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.28■□□□□ 0.2
SMARCB1-204ENST00000407422 OR2T2Q6IF00 324 aa16.28■□□□□ 0.2
SMARCB1-204ENST00000407422 SHQ1Q6PI26 577 aaKnown RBP16.28■□□□□ 0.2
SMARCB1-204ENST00000407422 FBXW12Q6X9E4 464 aa16.28■□□□□ 0.2
SMARCB1-204ENST00000407422 OR4C15Q8NGM1 316 aa16.28■□□□□ 0.2
SMARCB1-204ENST00000407422 APOBEC3DQ96AK3 386 aaPredicted RBP16.28■□□□□ 0.2
SMARCB1-204ENST00000407422 PLA2G12AQ9BZM1 189 aa16.28■□□□□ 0.2
SMARCB1-204ENST00000407422 WDR76Q9H967 626 aa16.28■□□□□ 0.2
SMARCB1-204ENST00000407422 TMEM106BQ9NUM4 274 aa16.28■□□□□ 0.2
SMARCB1-204ENST00000407422 NPTNQ9Y639 398 aa16.28■□□□□ 0.2
SMARCB1-204ENST00000407422 TNFRSF11BO00300 401 aa16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 GASTP01350 101 aa16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 IGHV2-70P01814 119 aa16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 SBK2P0C263 348 aa16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 GGT2P36268 569 aa16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 MAGEA2P43356 314 aa16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 KRTAP27-1Q3LI81 207 aa16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 ZNF770Q6IQ21 691 aaPredicted RBP16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 PEG10Q86TG7 708 aaKnown RBP16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 CYB561A3Q8NBI2 242 aa16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 OR5L1Q8NGL2 311 aa16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 NSL1Q96IY1 281 aa16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 OR2V2Q96R30 315 aa16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 TMPRSS13Q9BYE2 586 aa16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 MRPL22Q9NWU5 206 aaKnown RBP16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 IL19Q9UHD0 177 aa16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 CYB5R1Q9UHQ9 305 aa16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 CDH10Q9Y6N8 788 aa16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 TENM1Q9UKZ4 2725 aa16.27■□□□□ 0.2
SMARCB1-204ENST00000407422 A0A0G2JMP0 313 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 A0A0X1KG70 313 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 J3QW42 95 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 BHLHE40O14503 412 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 HLA-DQA2P01906 255 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 TNFRSF1AP19438 455 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 PRSS12P56730 875 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 LCN2P80188 198 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 MS4A2Q01362 244 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 ZNF283Q8N7M2 679 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 ATG16L2Q8NAA4 619 aa16.27■□□□□ 0.19
SMARCB1-204ENST00000407422 OR4M2Q8NGB6 313 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms