RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 KCNJ15Q99712 375 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 NICN1Q9BSH3 213 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 DPCDQ9BVM2 203 aaPredicted RBP4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 ENY2Q9NPA8 101 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 EHFQ9NZC4 300 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 FBXL4Q9UKA2 621 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 POU2F3Q9UKI9 436 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 PCDHGA1Q9Y5H4 931 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 NUP214P35658 2090 aaPredicted RBP4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 SCN5AQ14524 2016 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 PLSCR5A0PG75 271 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 TRIM64A6NGJ6 449 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 DBHP09172 617 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 CSF3P09919 207 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 GAAP10253 952 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 ZNF16P17020 682 aaPredicted RBP4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 ALOX5APP20292 161 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 CDKN2AP42771 156 aaKnown RBP4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 MMP15P51511 669 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 CLDN15P56746 228 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 LRRC37A5PQ49AS3 106 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 DMKNQ6E0U4 476 aaPredicted RBP4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 Q7L0L9 218 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 ZAR1Q86SH2 424 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 PRSS35Q8N3Z0 413 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 ARHGEF39Q8N4T4 335 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 OR6X1Q8NH79 312 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 ELMOD3Q96FG2 381 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 SF3B5Q9BWJ5 86 aaKnown RBP4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 MFFQ9GZY8 342 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 NELFAQ9H3P2 528 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 GALNT9Q9HCQ5 603 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 PIGLQ9Y2B2 252 aa4.27□□□□□ -1.73
PCDH11X-207ENST00000406881 TRAV17A0A0B4J275 112 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 AQP8O94778 261 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 IFNA5P01569 189 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 GSTP1P09211 210 aaKnown RBP4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 ZNF44P15621 663 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 GABRB1P18505 474 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 TGFBR1P36897 503 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 RBP2P50120 134 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 SNU13P55769 128 aaKnown RBP4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 FUT5Q11128 374 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 MTFR2Q6P444 385 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 LHFPL2Q6ZUX7 228 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 CMTM4Q8IZR5 234 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 GTPBP8Q8N3Z3 284 aaPredicted RBP4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 MFSD4AQ8N468 514 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 CELF2-AS1Q8N7Q2 184 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 NPEPL1Q8NDH3 523 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 OR52I2Q8NH67 350 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 OR51E1Q8TCB6 317 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 SCGB1C1Q8TD33 95 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 SMIM4Q8WVI0 70 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 TOMM40LQ969M1 308 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 CCDC120Q96HB5 630 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 GPX7Q96SL4 187 aaPredicted RBP4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 PRSS27Q9BQR3 290 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 TSPAN10Q9H1Z9 355 aaPredicted RBP4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 GPR84Q9NQS5 396 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 OCIAD1Q9NX40 245 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 CGGBP1Q9UFW8 167 aaPredicted RBP4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 ZNF223Q9UK11 482 aaPredicted RBP4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 SLC22A13Q9Y226 551 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 A0A0D9SG52 128 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 MEIS3P1A6NDR6 274 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 C4orf47A7E2U8 309 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 RRP8O43159 456 aaKnown RBP4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 XRCC3O43542 346 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 OR7C1O76099 320 aaPredicted RBP4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 TXNDC12O95881 172 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 KNG1P01042 644 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 HLA-AP01891 365 aaKnown RBP4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 BGLAPP02818 100 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 CNR1P21554 472 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 HOXA6P31267 233 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 EIF2S3P41091 472 aaKnown RBP4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 RFX2P48378 723 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 NKX2-5P52952 324 aaPredicted RBP4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 ZP4Q12836 540 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 SRSF5Q13243 272 aaKnown RBP4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 RAB35Q15286 201 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 RNPS1Q15287 305 aaKnown RBP4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 STK11Q15831 433 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 KCNJ8Q15842 424 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 EXOSC6Q5RKV6 272 aaKnown RBP4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 DRAM2Q6UX65 266 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 PLXDC2Q6UX71 529 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 RFPL4BQ6ZWI9 263 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 CD163Q86VB7 1156 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 STX12Q86Y82 276 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 CCDC71Q8IV32 467 aaPredicted RBP4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 ZNF695Q8IW36 515 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 C9orf40Q8IXQ3 194 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 SLC25A45Q8N413 288 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 STOML3Q8TAV4 291 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 SAP25Q8TEE9 199 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 ASB13Q8WXK3 278 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 MOGAT1Q96PD6 335 aa4.26□□□□□ -1.73
PCDH11X-207ENST00000406881 FAM117AQ9C073 453 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms