RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 C1orf198Q9H425 327 aa12.42□□□□□ -0.42
PRAME-205ENST00000405655 RYDENQ9NUL5 291 aaKnown RBP12.42□□□□□ -0.42
PRAME-205ENST00000405655 SPATA2Q9UM82 520 aa12.42□□□□□ -0.42
PRAME-205ENST00000405655 FLVCR1Q9Y5Y0 555 aa12.42□□□□□ -0.42
PRAME-205ENST00000405655 MAP1BP46821 2468 aaKnown RBP12.41□□□□□ -0.42
PRAME-205ENST00000405655 ANKRD11Q6UB99 2663 aaPredicted RBP12.41□□□□□ -0.42
PRAME-205ENST00000405655 PIEZO2Q9H5I5 2752 aa12.41□□□□□ -0.42
PRAME-205ENST00000405655 MEIOCA2RUB1 952 aa12.41□□□□□ -0.42
PRAME-205ENST00000405655 ZNF716A6NP11 495 aa12.41□□□□□ -0.42
PRAME-205ENST00000405655 CDRT15L2A8MXV6 281 aa12.41□□□□□ -0.42
PRAME-205ENST00000405655 TM4SF5O14894 197 aa12.41□□□□□ -0.42
PRAME-205ENST00000405655 HRGP04196 525 aa12.41□□□□□ -0.42
PRAME-205ENST00000405655 CSRP1P21291 193 aaKnown RBP12.41□□□□□ -0.42
PRAME-205ENST00000405655 CCL11P51671 97 aa12.41□□□□□ -0.42
PRAME-205ENST00000405655 RAC3P60763 192 aa12.41□□□□□ -0.42
PRAME-205ENST00000405655 CSNK2A1P68400 391 aaPredicted RBP12.41□□□□□ -0.42
PRAME-205ENST00000405655 AIMP2Q13155 320 aaKnown RBP12.41□□□□□ -0.42
PRAME-205ENST00000405655 BCL2L15Q5TBC7 163 aa12.41□□□□□ -0.42
PRAME-205ENST00000405655 OR2AJ1Q8NGZ0 328 aa12.41□□□□□ -0.42
PRAME-205ENST00000405655 OR2V1Q8NHB1 315 aa12.41□□□□□ -0.42
PRAME-205ENST00000405655 FGFBP3Q8TAT2 258 aa12.41□□□□□ -0.42
PRAME-205ENST00000405655 TMEM54Q969K7 222 aa12.41□□□□□ -0.42
PRAME-205ENST00000405655 FBXO17Q96EF6 278 aa12.41□□□□□ -0.42
PRAME-205ENST00000405655 ADAT3Q96EY9 351 aaPredicted RBP12.41□□□□□ -0.42
PRAME-205ENST00000405655 KCNJ15Q99712 375 aa12.41□□□□□ -0.42
PRAME-205ENST00000405655 TEKT2Q9UIF3 430 aa12.41□□□□□ -0.42
PRAME-205ENST00000405655 PRR14LQ5THK1 2151 aa12.41□□□□□ -0.42
PRAME-205ENST00000405655 TNFRSF10AO00220 468 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 KDM4BO94953 1096 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 APOA1P02647 267 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 ABOP16442 354 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 RBMS1P29558 406 aaKnown RBP12.4□□□□□ -0.42
PRAME-205ENST00000405655 TALDO1P37837 337 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 MEOX1P50221 254 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 CCR9P51686 369 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 NKX2-5P52952 324 aaPredicted RBP12.4□□□□□ -0.42
PRAME-205ENST00000405655 FOXG1P55316 489 aaPredicted RBP12.4□□□□□ -0.42
PRAME-205ENST00000405655 TPTEP56180 551 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 ZNF121P58317 390 aaPredicted RBP12.4□□□□□ -0.42
PRAME-205ENST00000405655 ENDOGQ14249 297 aaKnown RBP12.4□□□□□ -0.42
PRAME-205ENST00000405655 RSPO1Q2MKA7 263 aaPredicted RBP12.4□□□□□ -0.42
PRAME-205ENST00000405655 SLC36A2Q495M3 483 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 RTN4RL2Q86UN3 420 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 FAM173AQ9BQD7 235 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 LRFN3Q9BTN0 628 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 CRLF2Q9HC73 371 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 ADAM30Q9UKF2 790 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 LOC102725191A0A1B0GVB3 256 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 F5H5K5 113 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 LYRM1O43325 122 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 EIF1BO60739 113 aaKnown RBP12.4□□□□□ -0.42
PRAME-205ENST00000405655 CDK2P24941 298 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 PLGLB1Q02325 96 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 GPR176Q14439 515 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 TAF13Q15543 124 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 FAM57BQ71RH2 274 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 MED12LQ86YW9 2145 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 OR8B12Q8NGG6 310 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 OR1J2Q8NGS2 313 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 HAVCR2Q8TDQ0 301 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 YIPF5Q969M3 257 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 KIAA1143Q96AT1 154 aaPredicted RBP12.4□□□□□ -0.42
PRAME-205ENST00000405655 NAA11Q9BSU3 229 aaPredicted RBP12.4□□□□□ -0.42
PRAME-205ENST00000405655 OR2B2Q9GZK3 357 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 ABRACLQ9P1F3 81 aa12.4□□□□□ -0.42
PRAME-205ENST00000405655 FOXD3Q9UJU5 478 aaPredicted RBP12.4□□□□□ -0.42
PRAME-205ENST00000405655 ELF5Q9UKW6 265 aaPredicted RBP12.4□□□□□ -0.42
PRAME-205ENST00000405655 MEIS3P1A6NDR6 274 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 PDCD5O14737 125 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 B4GALT1P15291 398 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 HSD11B1P28845 292 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 LHX2P50458 406 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 TMEM255AQ5JRV8 349 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 UBE2NLQ5JXB2 153 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 FAAP20Q6NZ36 180 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 FAM71F1Q96KD3 344 aaPredicted RBP12.39□□□□□ -0.43
PRAME-205ENST00000405655 BEX2Q9BXY8 128 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 ULBP2Q9BZM5 246 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.39□□□□□ -0.435e-13■■■■■ 38.9
PRAME-205ENST00000405655 KLK11Q9UBX7 282 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 BOKQ9UMX3 212 aaPredicted RBP12.39□□□□□ -0.43
PRAME-205ENST00000405655 A0A1B0GTI1 187 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 DHHO43323 396 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 LRP3O75074 770 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 SP1P08047 785 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 FAM157BP0CG42 384 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 MAP2K3P46734 347 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 CX3CR1P49238 355 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 CLDN18P56856 261 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 SFRP5Q5T4F7 317 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 JMJD6Q6NYC1 403 aaPredicted RBP12.39□□□□□ -0.43
PRAME-205ENST00000405655 COMMD2Q86X83 199 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 OR52I2Q8NH67 350 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 RFT1Q96AA3 541 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 UPRTQ96BW1 309 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 SLC22A4Q9H015 551 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 SLITRK2Q9H156 845 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 FOXJ3Q9UPW0 622 aa12.39□□□□□ -0.43
PRAME-205ENST00000405655 HLA-DQB1P01920 261 aa12.38□□□□□ -0.43
PRAME-205ENST00000405655 MT-ND4P03905 459 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms