RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PRSS35Q8N3Z0 413 aa18.46■□□□□ 0.55
TPM1-208ENST00000404484 ST6GALNAC3Q8NDV1 305 aa18.46■□□□□ 0.55
TPM1-208ENST00000404484 GPR148Q8TDV2 347 aa18.46■□□□□ 0.55
TPM1-208ENST00000404484 WNT2BQ93097 391 aa18.46■□□□□ 0.55
TPM1-208ENST00000404484 SLC7A10Q9NS82 523 aa18.46■□□□□ 0.55
TPM1-208ENST00000404484 GTF2A1LQ9UNN4 478 aa18.46■□□□□ 0.55
TPM1-208ENST00000404484 PMF1-BGLAPU3KQ54 211 aa18.46■□□□□ 0.55
TPM1-208ENST00000404484 TMEM269A0A1B0GVZ9 245 aa18.45■□□□□ 0.54
TPM1-208ENST00000404484 SRSF10O75494 262 aaKnown RBP18.45■□□□□ 0.54
TPM1-208ENST00000404484 EDN3P14138 238 aa18.45■□□□□ 0.54
TPM1-208ENST00000404484 KIR3DL2P43630 455 aa18.45■□□□□ 0.54
TPM1-208ENST00000404484 TDGF1P3P51864 188 aa18.45■□□□□ 0.54
TPM1-208ENST00000404484 PSMA6P60900 246 aaKnown RBP18.45■□□□□ 0.54
TPM1-208ENST00000404484 HIST1H3AP68431 136 aa18.45■□□□□ 0.54
TPM1-208ENST00000404484 MXD1Q05195 221 aa18.45■□□□□ 0.54
TPM1-208ENST00000404484 SCRN3Q0VDG4 424 aa18.45■□□□□ 0.54
TPM1-208ENST00000404484 INSL4Q14641 139 aa18.45■□□□□ 0.54
TPM1-208ENST00000404484 MOGQ16653 247 aa18.45■□□□□ 0.54
TPM1-208ENST00000404484 HIST2H3PS2Q5TEC6 136 aa18.45■□□□□ 0.54
TPM1-208ENST00000404484 HIST2H3AQ71DI3 136 aa18.45■□□□□ 0.54
TPM1-208ENST00000404484 LINGO2Q7L985 606 aa18.45■□□□□ 0.54
TPM1-208ENST00000404484 OR10S1Q8NGN2 331 aa18.45■□□□□ 0.54
TPM1-208ENST00000404484 ZFAND2BQ8WV99 257 aa18.45■□□□□ 0.54
TPM1-208ENST00000404484 ZNF837Q96EG3 531 aaPredicted RBP18.45■□□□□ 0.54
TPM1-208ENST00000404484 DDX28Q9NUL7 540 aaKnown RBP18.45■□□□□ 0.54
TPM1-208ENST00000404484 CRNNQ9UBG3 495 aaPredicted RBP18.45■□□□□ 0.54
TPM1-208ENST00000404484 EMC9Q9Y3B6 208 aa18.45■□□□□ 0.54
TPM1-208ENST00000404484 A0A075B6Q4 140 aa18.44■□□□□ 0.54
TPM1-208ENST00000404484 TRAV1-2A0A0B4J238 106 aa18.44■□□□□ 0.54
TPM1-208ENST00000404484 RER1O15258 196 aa18.44■□□□□ 0.54
TPM1-208ENST00000404484 UCHL1P09936 223 aa18.44■□□□□ 0.54
TPM1-208ENST00000404484 PTGER4P35408 488 aa18.44■□□□□ 0.54
TPM1-208ENST00000404484 Q499Y3 187 aa18.44■□□□□ 0.54
TPM1-208ENST00000404484 ACSF3Q4G176 576 aaPredicted RBP18.44■□□□□ 0.54
TPM1-208ENST00000404484 BCL2L15Q5TBC7 163 aa18.44■□□□□ 0.54
TPM1-208ENST00000404484 ZNF704Q6ZNC4 412 aaPredicted RBP18.44■□□□□ 0.54
TPM1-208ENST00000404484 LRRC18Q8N456 261 aa18.44■□□□□ 0.54
TPM1-208ENST00000404484 SLC22A24Q8N4F4 322 aa18.44■□□□□ 0.54
TPM1-208ENST00000404484 OR5M9Q8NGP3 310 aa18.44■□□□□ 0.54
TPM1-208ENST00000404484 OR13C5Q8NGS8 318 aa18.44■□□□□ 0.54
TPM1-208ENST00000404484 PRR7Q8TB68 274 aa18.44■□□□□ 0.54
TPM1-208ENST00000404484 AP3S1Q92572 193 aa18.44■□□□□ 0.54
TPM1-208ENST00000404484 PHF3Q92576 2039 aaKnown RBP18.44■□□□□ 0.54
TPM1-208ENST00000404484 HTRA1Q92743 480 aa18.44■□□□□ 0.54
TPM1-208ENST00000404484 TPK1Q9H3S4 243 aa18.44■□□□□ 0.54
TPM1-208ENST00000404484 PNRC2Q9NPJ4 139 aaKnown RBP18.44■□□□□ 0.54
TPM1-208ENST00000404484 OR52A1Q9UKL2 312 aa18.44■□□□□ 0.54
TPM1-208ENST00000404484 FBXL3Q9UKT7 428 aa18.44■□□□□ 0.54
TPM1-208ENST00000404484 TRBV5-5A0A0J9YX44 114 aa18.43■□□□□ 0.54
TPM1-208ENST00000404484 PNPP00491 289 aa18.43■□□□□ 0.54
TPM1-208ENST00000404484 APOC1P02654 83 aa18.43■□□□□ 0.54
TPM1-208ENST00000404484 UBCP0CG48 685 aaKnown RBP18.43■□□□□ 0.54
TPM1-208ENST00000404484 GABRA1P14867 456 aa18.43■□□□□ 0.54
TPM1-208ENST00000404484 CFL1P23528 166 aaKnown RBP18.43■□□□□ 0.54
TPM1-208ENST00000404484 MFGE8Q08431 387 aaPredicted RBP18.43■□□□□ 0.54
TPM1-208ENST00000404484 HNRNPA0Q13151 305 aaKnown RBP18.43■□□□□ 0.54
TPM1-208ENST00000404484 HSD17B12Q53GQ0 312 aa18.43■□□□□ 0.54
TPM1-208ENST00000404484 ZNF813Q6ZN06 617 aa18.43■□□□□ 0.54
TPM1-208ENST00000404484 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.43■□□□□ 0.54
TPM1-208ENST00000404484 NUFIP2Q7Z417 695 aaKnown RBP18.43■□□□□ 0.54
TPM1-208ENST00000404484 CROCCP3Q8IVE0 287 aa18.43■□□□□ 0.54
TPM1-208ENST00000404484 IL17RDQ8NFM7 739 aa18.43■□□□□ 0.54
TPM1-208ENST00000404484 S100ZQ8WXG8 99 aa18.43■□□□□ 0.54
TPM1-208ENST00000404484 OR14A2Q96R54 314 aa18.43■□□□□ 0.54
TPM1-208ENST00000404484 ATF6BQ99941 703 aa18.43■□□□□ 0.54
TPM1-208ENST00000404484 HDHD2Q9H0R4 259 aa18.43■□□□□ 0.54
TPM1-208ENST00000404484 FLNBO75369 2602 aaKnown RBP18.43■□□□□ 0.54
TPM1-208ENST00000404484 RAF1P04049 648 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 OCM2P0CE71 109 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 B4GALT1P15291 398 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 CTSSP25774 331 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 S100A5P33763 92 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 OR3A2P47893 321 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 ECH1Q13011 328 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 ELFN2Q5R3F8 820 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 TMEM244Q5VVB8 128 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 NSUN5P2Q63ZY6 315 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 ZNF627Q7L945 461 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 UBE2J2Q8N2K1 259 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 OR6Q1Q8NGQ2 317 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 RGP1Q92546 391 aaPredicted RBP18.42■□□□□ 0.54
TPM1-208ENST00000404484 KCNJ15Q99712 375 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 C6orf62Q9GZU0 229 aaPredicted RBP18.42■□□□□ 0.54
TPM1-208ENST00000404484 FAM206AQ9NX38 181 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 PEX16Q9Y5Y5 336 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 DOPEY2Q9Y3R5 2298 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 IQCMA0A1B0GVH7 501 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 CLEC18AA5D8T8 446 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 ACOD1A6NK06 481 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 WDR1O75083 606 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 IGHV3-9P01782 118 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 ISG15P05161 165 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 ACHEP22303 614 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 RAB35Q15286 201 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 CLEC18BQ6UXF7 455 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 SLC16A14Q7RTX9 510 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 FGD2Q7Z6J4 655 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 CLEC18CQ8NCF0 446 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 FBXO17Q96EF6 278 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 DERL3Q96Q80 235 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms