RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 THAP5Q7Z6K1 395 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 ZNF584Q8IVC4 421 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 C8orf59Q8N0T1 100 aaPredicted RBP7.97□□□□□ -1.13
VPS53-203ENST00000401468 FGFBP3Q8TAT2 258 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 NSMAFQ92636 917 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 RFKQ969G6 155 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 MBD6Q96DN6 1003 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 FBXO17Q96EF6 278 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 Q96MT0 163 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 C1QTNF6Q9BXI9 259 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 ADGRL4Q9HBW9 690 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 NOX3Q9HBY0 568 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 PLCXD1Q9NUJ7 323 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 NPAP1Q9NZP6 1156 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.97□□□□□ -1.13
VPS53-203ENST00000401468 LRRC42Q9Y546 428 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 STAB1Q9NY15 2570 aa7.97□□□□□ -1.13
VPS53-203ENST00000401468 JMJD1CQ15652 2540 aa7.96□□□□□ -1.13
VPS53-203ENST00000401468 A0A096LPE4 126 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 A0A1W2PPL8 197 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 A0A1W2PPZ6 126 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 A6NHS1 94 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 C12orf71A8MTZ7 269 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 FAM171A2A8MVW0 826 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 ICMTO60725 284 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 LY6G6DO95868 133 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 WNT11O96014 354 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 INHBBP09529 407 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 SBK2P0C263 348 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 COX5BP10606 129 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 CBR1P16152 277 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 OTX1P32242 354 aaPredicted RBP7.96□□□□□ -1.14
VPS53-203ENST00000401468 ARR3P36575 388 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 CDKN1AP38936 164 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 GUCA1AP43080 201 aaPredicted RBP7.96□□□□□ -1.14
VPS53-203ENST00000401468 ENTPD1P49961 510 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 CDH11P55287 796 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 SPOCK1Q08629 439 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 CDK5R2Q13319 367 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 PPA1Q15181 289 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 MEP1BQ16820 701 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 SLC36A2Q495M3 483 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 LCN1P1Q5VSP4 162 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 CLEC9AQ6UXN8 241 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 SLC16A14Q7RTX9 510 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 SLC16A9Q7RTY1 509 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 KBTBD8Q8NFY9 601 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 OR51L1Q8NGJ5 315 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 ST7LQ8TDW4 575 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 AKAP1Q92667 903 aaKnown RBP eCLIP7.96□□□□□ -1.14
VPS53-203ENST00000401468 INTS14Q96SY0 518 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 MNTQ99583 582 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 SH3GL3Q99963 347 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 JAM3Q9BX67 310 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 YIPF3Q9GZM5 350 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 OR51V1Q9H2C8 321 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 C7orf69Q9H7B7 122 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 WDR76Q9H967 626 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 SEC61A2Q9H9S3 476 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 EMC7Q9NPA0 242 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 PNRC2Q9NPJ4 139 aaKnown RBP7.96□□□□□ -1.14
VPS53-203ENST00000401468 DDX28Q9NUL7 540 aaKnown RBP7.96□□□□□ -1.14
VPS53-203ENST00000401468 FKBP14Q9NWM8 211 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 CLN6Q9NWW5 311 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 DNAJC27Q9NZQ0 273 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 FBXL3Q9UKT7 428 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 LAMP3Q9UQV4 416 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 EXOGQ9Y2C4 368 aaKnown RBP7.96□□□□□ -1.14
VPS53-203ENST00000401468 TIMM10BQ9Y5J6 103 aa7.96□□□□□ -1.14
VPS53-203ENST00000401468 OR6C6A6NF89 314 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 TVP23AA6NH52 213 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 SNTNA6NMZ2 147 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 ZNF593O00488 134 aaPredicted RBP7.95□□□□□ -1.14
VPS53-203ENST00000401468 SYNGR3O43761 229 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 NDUFS7O75251 213 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 HLA-HP01893 362 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 SERPINA5P05154 406 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 DBTP11182 482 aaKnown RBP7.95□□□□□ -1.14
VPS53-203ENST00000401468 PIPP12273 146 aaPredicted RBP7.95□□□□□ -1.14
VPS53-203ENST00000401468 ZNF32P17041 273 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 ALOX5APP20292 161 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 MTNR1AP48039 350 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 PTH2RP49190 550 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 UBE2NP61088 152 aaKnown RBP7.95□□□□□ -1.14
VPS53-203ENST00000401468 RAB1AP62820 205 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 PSG4Q00888 419 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 IL5RAQ01344 420 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 ZNF91Q05481 1191 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 SGCAQ16586 387 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 GSG1Q2KHT4 349 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 CCDC92Q53HC0 331 aaPredicted RBP7.95□□□□□ -1.14
VPS53-203ENST00000401468 SHFQ7M4L6 423 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 MDP1Q86V88 176 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 EGFL6Q8IUX8 553 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 LRRC18Q8N456 261 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 GJC3Q8NFK1 279 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 OR10S1Q8NGN2 331 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 OR6K6Q8NGW6 343 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 LILRB1Q8NHL6 650 aaPredicted RBP7.95□□□□□ -1.14
VPS53-203ENST00000401468 OTOSQ8NHW6 89 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms