RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 COMTD1Q86VU5 262 aa2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 HORMAD1Q86X24 394 aa2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 MREGQ8N565 214 aa2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 DUSP18Q8NEJ0 188 aa2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 NOXO1Q8NFA2 376 aa2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 TMEM230Q96A57 120 aa2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 RPEQ96AT9 228 aa2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 SCGB3A2Q96PL1 93 aa2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 RASL11BQ9BPW5 248 aa2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 MAP1LC3CQ9BXW4 147 aa2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 OR11A1Q9GZK7 315 aa2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 SPACA1Q9HBV2 294 aa2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 VCX3AQ9NNX9 186 aa2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 SLCO1B3Q9NPD5 702 aa2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 SLC17A7Q9P2U7 560 aa2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 ZNF629Q9UEG4 869 aaPredicted RBP2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 HEBP2Q9Y5Z4 205 aa2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 MRPS18BQ9Y676 258 aaKnown RBP2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 V9GYY9 64 aa2.98□□□□□ -1.93
SAMSN1-202ENST00000400564 MAPK8IP3Q9UPT6 1336 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 WI2-2373I1.2A0A1W2PRP0 233 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 NCBP2LA6PVI3 153 aaKnown RBP2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 HACD1B0YJ81 288 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 GABRPO00591 440 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 SLC31A2O15432 143 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 SUPT7LO94864 414 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 EIF4EP06730 217 aaKnown RBP2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 F2RP25116 425 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 CSNK1A1P48729 337 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 SEMG2Q02383 582 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 TCP10Q12799 353 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 ART3Q13508 389 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 ZNF266Q14584 549 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 USF2Q15853 346 aaPredicted RBP2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 SGCAQ16586 387 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 C18orf21Q32NC0 220 aaPredicted RBP2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 UBE2UQ5VVX9 321 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 PDPK2PQ6A1A2 396 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 C6orf89Q6UWU4 347 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 CBLN2Q8IUK8 224 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 CBR4Q8N4T8 237 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 C14orf178Q8N769 122 aaPredicted RBP2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 OR2L5Q8NG80 312 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 OR52E2Q8NGJ4 325 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 OR6K6Q8NGW6 343 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 NEIL3Q8TAT5 605 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 LRRC29Q8WV35 223 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 DNAJC19Q96DA6 116 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 FAM122AQ96E09 287 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 ZNF285Q96NJ3 590 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 UTP23Q9BRU9 249 aaKnown RBP2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 CHMP4BQ9H444 224 aaKnown RBP2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 SLC39A1Q9NY26 324 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 CTSFQ9UBX1 484 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 CEMIPQ8WUJ3 1361 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 TNRQ92752 1358 aa2.97□□□□□ -1.93
SAMSN1-202ENST00000400564 AQRO60306 1485 aaKnown RBP eCLIP2.97□□□□□ -1.933e-7■■■■■ 37.1
SAMSN1-202ENST00000400564 A0A0G2JN53 185 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 A0A1B0GW15 77 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 E7EWF7 191 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 XKRYO14609 159 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 AQP8O94778 261 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 HPRT1P00492 218 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 OXTP01178 125 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 HPNP05981 417 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 OR5H8P0DN80 308 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 SPAM1P38567 509 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 CEACAM3P40198 252 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 PAFAH1B2P68402 229 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 UNC119Q13432 240 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 ATP6V1FQ16864 119 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 NDUFAF6Q330K2 333 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 RFX4Q33E94 735 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 COA6Q5JTJ3 125 aaKnown RBP2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 RWDD4Q6NW29 188 aaKnown RBP2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 TMPRSS11AQ6ZMR5 421 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 LRRC8AQ8IWT6 810 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 FAM71AQ8IYT1 594 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 ARRDC1Q8N5I2 433 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 OR8D1Q8WZ84 308 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 CCDC124Q96CT7 223 aaKnown RBP2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 C16orf74Q96GX8 76 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 CENPNQ96H22 339 aaPredicted RBP2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 ZNF317Q96PQ6 595 aaPredicted RBP2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 UQCC2Q9BRT2 126 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 BBS2Q9BXC9 721 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 FRMD8P1Q9BZ68 369 aaPredicted RBP2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 STMN3Q9NZ72 180 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 CD300AQ9UGN4 299 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 NEUROG3Q9Y4Z2 214 aa2.96□□□□□ -1.94
SAMSN1-202ENST00000400564 SYCE1LA8MT33 242 aa2.95□□□□□ -1.94
SAMSN1-202ENST00000400564 H7C1H1 209 aa2.95□□□□□ -1.94
SAMSN1-202ENST00000400564 PANO1I0J062 215 aa2.95□□□□□ -1.94
SAMSN1-202ENST00000400564 FAM189A1O60320 539 aa2.95□□□□□ -1.94
SAMSN1-202ENST00000400564 SC5DO75845 299 aa2.95□□□□□ -1.94
SAMSN1-202ENST00000400564 YEATS4O95619 227 aa2.95□□□□□ -1.94
SAMSN1-202ENST00000400564 ACTL6AO96019 429 aa2.95□□□□□ -1.94
SAMSN1-202ENST00000400564 PRB2P02812 416 aaPredicted RBP2.95□□□□□ -1.94
SAMSN1-202ENST00000400564 RHOCP08134 193 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms