RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 COMMD3-BMI1R4GMX3 469 aa12.04□□□□□ -0.48
HLA-DQB1-202ENST00000399079 C17orf100A8MU93 164 aa12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 VWC2LB2RUY7 222 aa12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 EBAG9O00559 213 aa12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 SLC25A16P16260 332 aa12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 FASP25445 335 aa12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 GRK5P34947 590 aa12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 SLC25A1P53007 311 aa12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 CCL8P80075 99 aa12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 FAHD1Q6P587 224 aa12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 OR10S1Q8NGN2 331 aa12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 UBASH3BQ8TF42 649 aa12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 PIMREGQ9BSJ6 248 aa12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 BPESC1Q9GZL8 116 aa12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 SEMA6AQ9H2E6 1030 aa12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 PNRC2Q9NPJ4 139 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 HINT3Q9NQE9 182 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 KIF17Q9P2E2 1029 aa12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 NSD1Q96L73 2696 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 C2CD3Q4AC94 2353 aa12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 CHD3Q12873 2000 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ABCA1O95477 2261 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 F5H5K5 113 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 G3V2T6 193 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 SURF4O15260 269 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ZNF23P17027 643 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 COL8A2P25067 703 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 FMO3P31513 532 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 NR4A2P43354 598 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 MMP15P51511 669 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 CDK5Q00535 292 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 PSG7Q13046 419 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 GGTLC2Q14390 218 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 KPNB1Q14974 876 aaKnown RBP12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 LINC01590Q5TEZ4 76 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 NAA40Q86UY6 237 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 C1orf174Q8IYL3 243 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ZNF786Q8N393 782 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 SNX33Q8WV41 574 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 PYDC1Q8WXC3 89 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 COQ7Q99807 217 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ATF6BQ99941 703 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 MYOZ1Q9NP98 299 aaPredicted RBP12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 PAPOLBQ9NRJ5 636 aaKnown RBP12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ATPIF1Q9UII2 106 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 GPR160Q9UJ42 338 aa12.02□□□□□ -0.48
HLA-DQB1-202ENST00000399079 FN1P02751 2386 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB1-202ENST00000399079 NDUFS8O00217 210 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ZNF593O00488 134 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 MITFO75030 526 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 SPARCP09486 303 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 USF1P22415 310 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ACTR3P61158 418 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 LOXL1Q08397 574 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 HLXQ14774 488 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 PLBD1Q6P4A8 553 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 DCXRQ7Z4W1 244 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 CMBLQ96DG6 245 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 OR51V1Q9H2C8 321 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 MSL2Q9HCI7 577 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 HIVEP2P31629 2446 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 IGHV4-61A0A0C4DH41 118 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 PLSCR5A0PG75 271 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ZSCAN5BA6NJL1 495 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 SPRY3O43610 288 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ANOS1P23352 680 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 EPHA2P29317 976 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ENTPD1P49961 510 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ZNF81P51508 661 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 CRISP1P54107 249 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 RIN1Q13671 783 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 PTGES3Q15185 160 aaKnown RBP12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 MOGQ16653 247 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 TSTQ16762 297 aaKnown RBP12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 TMEM249Q2WGJ8 235 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 KRTAP27-1Q3LI81 207 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 HIPK1Q86Z02 1210 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ZDHHC13Q8IUH4 622 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 CPOQ8IVL8 374 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 YIPF5Q969M3 257 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 KRT84Q9NSB2 600 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 PTTG3PQ9NZH4 202 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 KCNG2Q9UJ96 466 aa12.01□□□□□ -0.49
HLA-DQB1-202ENST00000399079 PRR23D1E9PI22 279 aaPredicted RBP12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 H3BSA7 217 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 TIMM8AO60220 97 aaPredicted RBP12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 CDC14BO60729 498 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 IGHV1-46P01743 117 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 HMGN1P05114 100 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 ACSM4P0C7M7 580 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 PRR23D2P0DMB1 279 aaPredicted RBP12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 FCGR1AP12314 374 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 PAICSP22234 425 aaKnown RBP12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 GIFP27352 417 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 PRSS12P56730 875 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 PCK2Q16822 640 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 KLHL12Q53G59 568 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 SPRNQ5BIV9 151 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 KDM4DQ6B0I6 523 aa12□□□□□ -0.49
HLA-DQB1-202ENST00000399079 DPY19L4Q7Z388 723 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms