RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 IFI44Q8TCB0 444 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 DVL3Q92997 716 aaPredicted RBP7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 REEP6Q96HR9 211 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 ZNF2Q9BSG1 426 aaPredicted RBP7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 WWTR1Q9GZV5 400 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 PBOV1Q9GZY1 135 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 MTCH1Q9NZJ7 389 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 LINC01553A4QN01 128 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 M0R082 166 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 RRP8O43159 456 aaKnown RBP7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 OR2C1O95371 312 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 F10P00742 488 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 ATF1P18846 271 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 MDH2P40926 338 aaKnown RBP7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 PRAMEF20Q5VT98 475 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 LAIR1Q6GTX8 287 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 CPEB2Q7Z5Q1 589 aaKnown RBP7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 Q8IYB0 196 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 OR10R2Q8NGX6 335 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 XRCC3O43542 346 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 SLC19A1P41440 591 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 NDUFA6P56556 154 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 OR1D5P58170 312 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 CLINT1Q14677 625 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 PHYHD1Q5SRE7 291 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 ZDHHC23Q8IYP9 409 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 CCDC74AQ96AQ1 378 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 WDFY2Q96P53 400 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 SLC35D1Q9NTN3 355 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 TAS2R5Q9NYW4 299 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 SLC25A37Q9NYZ2 338 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 KIAA1456Q9P272 454 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 NDRG3Q9UGV2 375 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 AKR7A3O95154 331 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 QDPRP09417 244 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 OR10J4P0C629 311 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 OMGP23515 440 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 ACKR3P25106 362 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 SRP9P49458 86 aaKnown RBP7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 FUT6P51993 359 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 DMWDQ09019 674 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 SMAD4Q13485 552 aaKnown RBP7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 LIPNQ5VXI9 398 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 STAC2Q6ZMT1 411 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 TMEM182Q6ZP80 229 aaPredicted RBP7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 TSEN54Q7Z6J9 526 aaKnown RBP7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 ZNF439Q8NDP4 499 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 MAP6Q96JE9 813 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 EXOGQ9Y2C4 368 aaKnown RBP7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 SLC17A4Q9Y2C5 497 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 SLCO1B1Q9Y6L6 691 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 UMAD1C9J7I0 102 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 AQP8O94778 261 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 CXCL10P02778 98 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 M6PRP20645 277 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 TBXA2RP21731 343 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 SHBQ15464 509 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 CYHR1Q6ZMK1 362 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 CADM3Q8N126 398 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 ZNF511Q8NB15 262 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 ANGPTL6Q8NI99 470 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 NTNG2Q96CW9 530 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 SUCNR1Q9BXA5 334 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 OR51I2Q9H344 312 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 MBNL1Q9NR56 388 aaKnown RBP7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 PROCRQ9UNN8 238 aa7.61□□□□□ -1.19
SPTLC3-201ENST00000399002 PPP5D1E7EU14 171 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 ABCD4O14678 606 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 ANGPTL7O43827 346 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 ICMTO60725 284 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 B3GALNT1O75752 331 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 TPPPO94811 219 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 EN2P19622 333 aaPredicted RBP7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 GPR12P47775 334 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 NPBWR1P48145 328 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 KCNJ3P48549 501 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 RAG2P55895 527 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 LGALS4P56470 323 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 RUNX2Q13950 521 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 IGFBP7Q16270 282 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 ZNF385BQ569K4 471 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 RFLNAQ6ZTI6 216 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 FAM58AQ8N1B3 248 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 OR10Z1Q8NGY1 313 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 Q96M85 177 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 NDFIP1Q9BT67 221 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 UBE2ZQ9H832 354 aaPredicted RBP7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 GPR173Q9NS66 373 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 FLVCR1Q9Y5Y0 555 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 PAPPA2Q9BXP8 1791 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 DOCK1Q14185 1865 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 POU2F2P09086 479 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 PRR35P0CG20 571 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 MGST1P10620 155 aaKnown RBP7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 DEFA4P12838 97 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 GABRB1P18505 474 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 SH2D5Q6ZV89 423 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 OR51F2Q8NH61 342 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 DDOQ99489 341 aa7.6□□□□□ -1.19
SPTLC3-201ENST00000399002 ELF4Q99607 663 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms