RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 COTL1Q14019 142 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 CLINT1Q14677 625 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 YOD1Q5VVQ6 348 aaPredicted RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 PAPD4Q6PIY7 484 aaKnown RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 CLEC9AQ6UXN8 241 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 NPSR1Q6W5P4 371 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 LRRC69Q6ZNQ3 347 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 SLC35D2Q76EJ3 337 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 PXKQ7Z7A4 578 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 SLC35F2Q8IXU6 374 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 CARFQ8N187 725 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 NAXEQ8NCW5 288 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 OR4A4PQ8NGN8 299 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 OR10AC1Q8NH08 325 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 OR6X1Q8NH79 312 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 C16orf52Q8NHV5 167 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 SMIM10Q96HG1 83 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 TAAR9Q96RI9 348 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 MESP1Q9BRJ9 268 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 WNT5BQ9H1J7 359 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 PARPBPQ9NWS1 579 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 VSX1Q9NZR4 365 aaPredicted RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 OR5H14A6NHG9 310 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 ARL6IP5O75915 188 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 NDUFB2O95178 105 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 HCKP08631 526 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 SLC25A4P12235 298 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 TPT1P13693 172 aaKnown RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 SRMP19623 302 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 CDKN2AP42771 156 aaKnown RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 GFERP55789 205 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 FHL1Q13642 323 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 RSU1Q15404 277 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 TAF13Q15543 124 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 CD226Q15762 336 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 BEX5Q5H9J7 111 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 TMEM69Q5SWH9 247 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 C11orf87Q6NUJ2 197 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 ADAM5Q6NVV9 412 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 MED25Q71SY5 747 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 LRRTM1Q86UE6 522 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 INO80EQ8NBZ0 244 aaPredicted RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 ZNF563Q8TA94 476 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 NT5CQ8TCD5 201 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 CCDC107Q8WV48 283 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 S100A16Q96FQ6 103 aaKnown RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 TGM7Q96PF1 710 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 ADOQ96SZ5 270 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 CNN2Q99439 309 aaKnown RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 CHST5Q9GZS9 411 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 LAT2Q9GZY6 243 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 MTIF3Q9H2K0 278 aaKnown RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 TUBA4BQ9H853 241 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 ZMAT3Q9HA38 289 aaKnown RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 ACKR4Q9NPB9 350 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 MKKSQ9NPJ1 570 aaPredicted RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 KLHDC2Q9Y2U9 406 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 EML5Q05BV3 1969 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 LAMA5O15230 3695 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 A0A0J9YY10 115 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 TMEM272A0A1B0GTI8 110 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 ELOA3DA6NLF2 546 aaPredicted RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 MARCH11A6NNE9 402 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 SEMA4FO95754 770 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 CT45A8P0DMV1 189 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 CT45A9P0DMV2 189 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 GABRG2P18507 467 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 SLC2A5P22732 501 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 CRABP1P29762 137 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 OR2B8PP59922 312 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 RPS11P62280 158 aaKnown RBP eCLIP4.53□□□□□ -1.68
SSR1-202ENST00000397511 NHLH2Q02577 135 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 AIMP2Q13155 320 aaKnown RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 CDK5R1Q15078 307 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 HMGN3Q15651 99 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 ELOA3BQ3SY89 546 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 CT45A2Q5DJT8 189 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 C1QL3Q5VWW1 255 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 NSUN5P2Q63ZY6 315 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 DMKNQ6E0U4 476 aaPredicted RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 ULK3Q6PHR2 472 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 TTLL10Q6ZVT0 673 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 DPY19L4Q7Z388 723 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 ANGPTL5Q86XS5 388 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 UBAC2Q8NBM4 344 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 ELOA3Q8NG57 546 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 OR6N2Q8NGY6 317 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 OR8S1Q8NH09 359 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 GPBAR1Q8TDU6 330 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 THAP3Q8WTV1 239 aaPredicted RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 SMIM19Q96E16 107 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 MALSU1Q96EH3 234 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 ADAD1Q96M93 576 aaKnown RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 DGAT2Q96PD7 388 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 MICU1Q9BPX6 476 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 WDR76Q9H967 626 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 RHOFQ9HBH0 211 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 C19orf12Q9NSK7 152 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 TMEM100Q9NV29 134 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms