RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 RGS6P49758 472 aa21.77■■□□□ 1.08
TSPAN4-207ENST00000397411 PPP2R2BQ00005 443 aa21.77■■□□□ 1.08
TSPAN4-207ENST00000397411 MAD2L1BPQ15013 274 aaPredicted RBP21.77■■□□□ 1.08
TSPAN4-207ENST00000397411 ALKBH6Q3KRA9 238 aa21.77■■□□□ 1.08
TSPAN4-207ENST00000397411 CLEC2AQ6UVW9 174 aa21.77■■□□□ 1.08
TSPAN4-207ENST00000397411 RFPL4BQ6ZWI9 263 aa21.77■■□□□ 1.08
TSPAN4-207ENST00000397411 DCXRQ7Z4W1 244 aa21.77■■□□□ 1.08
TSPAN4-207ENST00000397411 ZCCHC24Q8N2G6 241 aaKnown RBP21.77■■□□□ 1.08
TSPAN4-207ENST00000397411 OR5L1Q8NGL2 311 aa21.77■■□□□ 1.08
TSPAN4-207ENST00000397411 IPCEF1Q8WWN9 437 aaPredicted RBP21.77■■□□□ 1.08
TSPAN4-207ENST00000397411 ZMYND19Q96E35 227 aaPredicted RBP21.77■■□□□ 1.08
TSPAN4-207ENST00000397411 SORCS2Q96PQ0 1159 aa21.77■■□□□ 1.08
TSPAN4-207ENST00000397411 ATF6BQ99941 703 aa21.77■■□□□ 1.08
TSPAN4-207ENST00000397411 RHNO1Q9BSD3 238 aa21.77■■□□□ 1.08
TSPAN4-207ENST00000397411 MYEF2Q9P2K5 600 aaKnown RBP21.77■■□□□ 1.08
TSPAN4-207ENST00000397411 ZAR1LA6NP61 321 aa21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 PRODHO43272 600 aa21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 TUBG1P23258 451 aa21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 EIF2B1Q14232 305 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 CARTPTQ16568 116 aa21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 TEX30Q5JUR7 227 aa21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 SLC35D3Q5M8T2 416 aa21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 LINC01590Q5TEZ4 76 aa21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 SLX4IPQ5VYV7 408 aa21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 SHFQ7M4L6 423 aa21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 PQLC1Q8N2U9 271 aa21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 NEU4Q8WWR8 484 aaPredicted RBP21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 SPTSSAQ969W0 71 aa21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 MARS2Q96GW9 593 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 MAP6Q96JE9 813 aa21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 C9orf16Q9BUW7 83 aa21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 TPK1Q9H3S4 243 aa21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 TUBG2Q9NRH3 451 aa21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 STARD10Q9Y365 291 aa21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 ITPR3Q14573 2671 aa21.76■■□□□ 1.07
TSPAN4-207ENST00000397411 TLX2O43763 284 aaPredicted RBP21.75■■□□□ 1.07
TSPAN4-207ENST00000397411 RAD23AP54725 363 aa21.75■■□□□ 1.07
TSPAN4-207ENST00000397411 TPTEP56180 551 aa21.75■■□□□ 1.07
TSPAN4-207ENST00000397411 DSCR9P59020 149 aa21.75■■□□□ 1.07
TSPAN4-207ENST00000397411 APOFQ13790 326 aa21.75■■□□□ 1.07
TSPAN4-207ENST00000397411 TCEANCQ8N8B7 351 aa21.75■■□□□ 1.07
TSPAN4-207ENST00000397411 KLF14Q8TD94 323 aaPredicted RBP21.75■■□□□ 1.07
TSPAN4-207ENST00000397411 TRIM64A6NGJ6 449 aa21.74■■□□□ 1.07
TSPAN4-207ENST00000397411 TRIM64BA6NI03 449 aa21.74■■□□□ 1.07
TSPAN4-207ENST00000397411 ANKRD65E5RJM6 399 aa21.74■■□□□ 1.07
TSPAN4-207ENST00000397411 EI24O14681 340 aa21.74■■□□□ 1.07
TSPAN4-207ENST00000397411 PRKYO43930 277 aa21.74■■□□□ 1.07
TSPAN4-207ENST00000397411 ICMTO60725 284 aa21.74■■□□□ 1.07
TSPAN4-207ENST00000397411 LY6HO94772 140 aa21.74■■□□□ 1.07
TSPAN4-207ENST00000397411 EPHA2P29317 976 aa21.74■■□□□ 1.07
TSPAN4-207ENST00000397411 DPY19L4Q7Z388 723 aa21.74■■□□□ 1.07
TSPAN4-207ENST00000397411 LURAP1LQ8IV03 231 aa21.74■■□□□ 1.07
TSPAN4-207ENST00000397411 CBR4Q8N4T8 237 aa21.74■■□□□ 1.07
TSPAN4-207ENST00000397411 BBS1Q8NFJ9 593 aa21.74■■□□□ 1.07
TSPAN4-207ENST00000397411 APOBEC3DQ96AK3 386 aaPredicted RBP21.74■■□□□ 1.07
TSPAN4-207ENST00000397411 SLAMF6Q96DU3 332 aa21.74■■□□□ 1.07
TSPAN4-207ENST00000397411 COPS4Q9BT78 406 aa21.74■■□□□ 1.07
TSPAN4-207ENST00000397411 TMUB1Q9BVT8 246 aa21.74■■□□□ 1.07
TSPAN4-207ENST00000397411 IGLV3-9A0A075B6K5 115 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 PLSCR5A0PG75 271 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 H3BSA7 217 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 IGHV3-13P01766 116 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 LCATP04180 440 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 NAT2P11245 290 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 POLR2IP36954 125 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 MPV17P39210 176 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 ALDH3A2P51648 485 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 TNK1Q13470 666 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 LCN1P1Q5VSP4 162 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 MBNL2Q5VZF2 373 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 C12orf73Q69YU5 71 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 ZBTB49Q6ZSB9 765 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 SPATC1Q76KD6 591 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 EME1Q96AY2 570 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 IL4I1Q96RQ9 567 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 GABARAPL3Q9BY60 117 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 USE1Q9NZ43 259 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 MED13LQ71F56 2210 aa21.73■■□□□ 1.07
TSPAN4-207ENST00000397411 H7C1Q1 480 aa21.72■■□□□ 1.07
TSPAN4-207ENST00000397411 SMAD7O15105 426 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-207ENST00000397411 TIMM8AO60220 97 aaPredicted RBP21.72■■□□□ 1.07
TSPAN4-207ENST00000397411 ALPLP05186 524 aa21.72■■□□□ 1.07
TSPAN4-207ENST00000397411 CSF3P09919 207 aa21.72■■□□□ 1.07
TSPAN4-207ENST00000397411 SLC15A1P46059 708 aa21.72■■□□□ 1.07
TSPAN4-207ENST00000397411 SLC6A9P48067 706 aa21.72■■□□□ 1.07
TSPAN4-207ENST00000397411 PDLIM4P50479 330 aa21.72■■□□□ 1.07
TSPAN4-207ENST00000397411 PCK2Q16822 640 aa21.72■■□□□ 1.07
TSPAN4-207ENST00000397411 ZIK1Q3SY52 487 aaPredicted RBP21.72■■□□□ 1.07
TSPAN4-207ENST00000397411 ZNF525Q8N782 197 aa21.72■■□□□ 1.07
TSPAN4-207ENST00000397411 TMEM163Q8TC26 289 aa21.72■■□□□ 1.07
TSPAN4-207ENST00000397411 THEM6Q8WUY1 208 aa21.72■■□□□ 1.07
TSPAN4-207ENST00000397411 FAM168AQ92567 244 aa21.72■■□□□ 1.07
TSPAN4-207ENST00000397411 TEAD3Q99594 435 aa21.72■■□□□ 1.07
TSPAN4-207ENST00000397411 PNRC2Q9NPJ4 139 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-207ENST00000397411 PTTG3PQ9NZH4 202 aa21.72■■□□□ 1.07
TSPAN4-207ENST00000397411 J3QW42 95 aa21.71■■□□□ 1.07
TSPAN4-207ENST00000397411 M0R129 80 aa21.71■■□□□ 1.07
TSPAN4-207ENST00000397411 SELENOFO60613 162 aa21.71■■□□□ 1.07
TSPAN4-207ENST00000397411 ACSM4P0C7M7 580 aa21.71■■□□□ 1.07
TSPAN4-207ENST00000397411 TIGD4Q8IY51 512 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms