RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 OR8B4Q96RC9 309 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 SPOCK3Q9BQ16 436 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 SLC24A3Q9HC58 644 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 ERVK13-1Q9NX77 482 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 ERVK-18Q9QC07 812 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 ATPIF1Q9UII2 106 aa20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 EXOSC1Q9Y3B2 195 aaKnown RBP20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 UTP20O75691 2785 aaKnown RBP20.48■□□□□ 0.87
TSPAN4-203ENST00000397397 LOC100509620A0A075B734 347 aa20.47■□□□□ 0.87
TSPAN4-203ENST00000397397 MAGEB4O15481 346 aaPredicted RBP20.47■□□□□ 0.87
TSPAN4-203ENST00000397397 CDK1P06493 297 aa20.47■□□□□ 0.87
TSPAN4-203ENST00000397397 MYL12AP19105 171 aa20.47■□□□□ 0.87
TSPAN4-203ENST00000397397 CCNOP22674 350 aa20.47■□□□□ 0.87
TSPAN4-203ENST00000397397 EEF1B2P24534 225 aaKnown RBP20.47■□□□□ 0.87
TSPAN4-203ENST00000397397 CD40P25942 277 aa20.47■□□□□ 0.87
TSPAN4-203ENST00000397397 COL8A1P27658 744 aa20.47■□□□□ 0.87
TSPAN4-203ENST00000397397 OPRL1P41146 370 aa20.47■□□□□ 0.87
TSPAN4-203ENST00000397397 EGR3Q06889 387 aa20.47■□□□□ 0.87
TSPAN4-203ENST00000397397 POM121L2Q96KW2 1035 aa20.47■□□□□ 0.87
TSPAN4-203ENST00000397397 JAM3Q9BX67 310 aa20.47■□□□□ 0.87
TSPAN4-203ENST00000397397 MROQ9BYG7 248 aa20.47■□□□□ 0.87
TSPAN4-203ENST00000397397 DUSP21Q9H596 190 aa20.47■□□□□ 0.87
TSPAN4-203ENST00000397397 CDH20Q9HBT6 801 aa20.47■□□□□ 0.87
TSPAN4-203ENST00000397397 C5orf49A4QMS7 147 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 DPRXA6NFQ7 191 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 DBHP09172 617 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 PTAFRP25105 342 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 HSD11B1P28845 292 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 GRB2P62993 217 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 GALK2Q01415 458 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 ROM1Q03395 351 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 GALEQ14376 348 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 BEX5Q5H9J7 111 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 SP5Q6BEB4 398 aaPredicted RBP20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 RHOUQ7L0Q8 258 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 ZNF679Q8IYX0 411 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 IL17RDQ8NFM7 739 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 SPTSSAQ969W0 71 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 MRPL48Q96GC5 212 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 PLPPR2Q96GM1 343 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 KCNS3Q9BQ31 491 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 ALG8Q9BVK2 526 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 ESRP2Q9H6T0 727 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 ELOVL3Q9HB03 270 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 CHCHD3Q9NX63 227 aaKnown RBP20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 NBPF19A0A087WUL8 3843 aa20.46■□□□□ 0.87
TSPAN4-203ENST00000397397 F5H5K5 113 aa20.45■□□□□ 0.86
TSPAN4-203ENST00000397397 KRT8P05787 483 aa20.45■□□□□ 0.86
TSPAN4-203ENST00000397397 LIMS3P0CW19 117 aa20.45■□□□□ 0.86
TSPAN4-203ENST00000397397 LIMS4P0CW20 117 aa20.45■□□□□ 0.86
TSPAN4-203ENST00000397397 C21orf33P30042 268 aaPredicted RBP20.45■□□□□ 0.86
TSPAN4-203ENST00000397397 ETV1P50549 477 aa20.45■□□□□ 0.86
TSPAN4-203ENST00000397397 CHN2P52757 468 aa20.45■□□□□ 0.86
TSPAN4-203ENST00000397397 NAAAQ02083 359 aa20.45■□□□□ 0.86
TSPAN4-203ENST00000397397 BSPH1Q075Z2 132 aa20.45■□□□□ 0.86
TSPAN4-203ENST00000397397 DEGS2Q6QHC5 323 aa20.45■□□□□ 0.86
TSPAN4-203ENST00000397397 MYCBPQ99417 103 aaPredicted RBP20.45■□□□□ 0.86
TSPAN4-203ENST00000397397 KCNJ15Q99712 375 aa20.45■□□□□ 0.86
TSPAN4-203ENST00000397397 ZNF649Q9BS31 505 aa20.45■□□□□ 0.86
TSPAN4-203ENST00000397397 MRM2Q9UI43 246 aaKnown RBP20.45■□□□□ 0.86
TSPAN4-203ENST00000397397 LRP12Q9Y561 859 aa20.45■□□□□ 0.86
TSPAN4-203ENST00000397397 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 RGS10O43665 173 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 ZNF254O75437 659 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 PRKXP51817 358 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 GABARAPL2P60520 117 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 RSPO1Q2MKA7 263 aaPredicted RBP20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 TP53I3Q53FA7 332 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 NCMAPQ5T1S8 102 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 PLEKHG7Q6ZR37 379 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 PAQR4Q8N4S7 273 aaPredicted RBP20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 YIPF7Q8N8F6 280 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 CCDC90BQ9GZT6 254 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 CLEC2DQ9UHP7 191 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 HEATR1Q9H583 2144 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 IGHV2OR16-5A0A0B4J2B6 119 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 METTL15A6NJ78 407 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 DEFB108AA8MXU0 73 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 CRYAAP02489 173 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 COX6B1P14854 86 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 CALCRP30988 508 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 RIDAP52758 137 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 TPTEP56180 551 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 ACTA2P62736 377 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 ACTG2P63267 376 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 KRTAP27-1Q3LI81 207 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 CDONQ4KMG0 1287 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 ZNF684Q5T5D7 378 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 FAM220AQ7Z4H9 259 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 ZNF283Q8N7M2 679 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 PIK3IP1Q96FE7 263 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 GNG8Q9UK08 70 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 GRIP1Q9Y3R0 1128 aa20.44■□□□□ 0.86
TSPAN4-203ENST00000397397 SPTAN1Q13813 2472 aaKnown RBP20.43■□□□□ 0.86
TSPAN4-203ENST00000397397 J3QLW9 94 aa20.43■□□□□ 0.86
TSPAN4-203ENST00000397397 M0R135 149 aa20.43■□□□□ 0.86
TSPAN4-203ENST00000397397 ABCD4O14678 606 aa20.43■□□□□ 0.86
TSPAN4-203ENST00000397397 SIAH2O43255 324 aa20.43■□□□□ 0.86
TSPAN4-203ENST00000397397 SULT1C4O75897 302 aa20.43■□□□□ 0.86
TSPAN4-203ENST00000397397 MT-ND2P03891 347 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms