RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 VSIG10L2P0DP72 767 aa21.21■□□□□ 0.99
PABPN1-202ENST00000397276 MRPS10P82664 201 aaKnown RBP21.21■□□□□ 0.99
PABPN1-202ENST00000397276 MYBPHQ13203 477 aa21.21■□□□□ 0.99
PABPN1-202ENST00000397276 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.21■□□□□ 0.99
PABPN1-202ENST00000397276 CPAMD8Q8IZJ3 1885 aa21.2■□□□□ 0.99
PABPN1-202ENST00000397276 NAP1L6A6NFF2 107 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 A6NIZ1 184 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 LIPT2A6NK58 231 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 CREBL2O60519 120 aaPredicted RBP21.2■□□□□ 0.98
PABPN1-202ENST00000397276 ZFAND5O76080 213 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 GIPP09681 153 aaPredicted RBP21.2■□□□□ 0.98
PABPN1-202ENST00000397276 S100A11P31949 105 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 RAP1BP61224 184 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 RAP1AP62834 184 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 PRAMEF20Q5VT98 475 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 C17orf107Q6ZR85 190 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 TMUB2Q71RG4 321 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 SPICQ8N5J4 248 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 DVL3Q92997 716 aaPredicted RBP21.2■□□□□ 0.98
PABPN1-202ENST00000397276 GAREM1Q9H706 876 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 OR52A1Q9UKL2 312 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 SLC17A2O00624 439 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 DNASE1L1P49184 302 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 SEC61A1P61619 476 aaKnown RBP21.2■□□□□ 0.98
PABPN1-202ENST00000397276 ZNF385CQ66K41 422 aaPredicted RBP21.2■□□□□ 0.98
PABPN1-202ENST00000397276 OR10K2Q6IF99 312 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 JAGN1Q8N5M9 183 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 CMKLR1Q99788 373 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 ZMAT3Q9HA38 289 aaKnown RBP21.2■□□□□ 0.98
PABPN1-202ENST00000397276 SERINC1Q9NRX5 453 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 SESN1Q9Y6P5 492 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 R4GMQ9 66 aa21.2■□□□□ 0.98
PABPN1-202ENST00000397276 TMEM272A0A1B0GTI8 110 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 P2RY10O00398 339 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 CELA2AP08217 269 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 DCAF12L2Q5VW00 463 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 ZNF626Q68DY1 528 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 TMEM205Q6UW68 189 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 ZNF454Q8N9F8 522 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 ST7LQ8TDW4 575 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 EMC3Q9P0I2 261 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 MRPS18BQ9Y676 258 aaKnown RBP21.19■□□□□ 0.98
PABPN1-202ENST00000397276 LOC107986453A0A1B0GWG9 222 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 OR2A4O95047 310 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 LDOC1O95751 146 aaPredicted RBP21.19■□□□□ 0.98
PABPN1-202ENST00000397276 SFTPDP35247 375 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 ZP4Q12836 540 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 CARD17Q5XLA6 110 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 DNM1P34Q6PK57 102 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 OVCH2Q7RTZ1 564 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 RELL2Q8NC24 303 aaPredicted RBP21.19■□□□□ 0.98
PABPN1-202ENST00000397276 MAFAQ8NHW3 353 aaPredicted RBP21.19■□□□□ 0.98
PABPN1-202ENST00000397276 POC1BQ8TC44 478 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 OR2A7Q96R45 310 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 DEFB126Q9BYW3 111 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 LOC100289279A0A1B0GTE1 492 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 TUBAL3A6NHL2 446 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 PDGFBP01127 241 aaPredicted RBP21.19■□□□□ 0.98
PABPN1-202ENST00000397276 H2BFMP0C1H6 154 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 PNLIPP16233 465 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 PTGDSP41222 190 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 RAP2BP61225 183 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 ZNF627Q7L945 461 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 SEC61A2Q9H9S3 476 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 G6PC2Q9NQR9 355 aa21.19■□□□□ 0.98
PABPN1-202ENST00000397276 ZNF28P17035 718 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 PLPPR5Q32ZL2 321 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 ELFN2Q5R3F8 820 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 OLFML2AQ68BL7 652 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 BVESQ8NE79 360 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 OR4C16Q8NGL9 310 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 C11orf40Q8WZ69 217 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 ST8SIA2Q92186 375 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 OR5B2Q96R09 309 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 ZNF275Q9NSD4 429 aaPredicted RBP21.18■□□□□ 0.98
PABPN1-202ENST00000397276 PFDN2Q9UHV9 154 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 HHLA2Q9UM44 414 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 WIF1Q9Y5W5 379 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 H7C417 338 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 PLATP00750 562 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 APOC3P02656 99 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 ZNF35P13682 527 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 HTR2CP28335 458 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 GLT8D1Q68CQ7 371 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 OR1S1Q8NH92 325 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 MTFP1Q9UDX5 166 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 RALGAPA1Q6GYQ0 2036 aa21.18■□□□□ 0.98
PABPN1-202ENST00000397276 A0A1W2PPC1 479 aa21.17■□□□□ 0.98
PABPN1-202ENST00000397276 PATE3B3GLJ2 98 aa21.17■□□□□ 0.98
PABPN1-202ENST00000397276 ZNF208O43345 1280 aa21.17■□□□□ 0.98
PABPN1-202ENST00000397276 SRSF10O75494 262 aaKnown RBP21.17■□□□□ 0.98
PABPN1-202ENST00000397276 RP2O75695 350 aa21.17■□□□□ 0.98
PABPN1-202ENST00000397276 SPDEFO95238 335 aa21.17■□□□□ 0.98
PABPN1-202ENST00000397276 FGF2P09038 288 aa21.17■□□□□ 0.98
PABPN1-202ENST00000397276 GTF2F2P13984 249 aa21.17■□□□□ 0.98
PABPN1-202ENST00000397276 GABRA1P14867 456 aa21.17■□□□□ 0.98
PABPN1-202ENST00000397276 CPN1P15169 458 aa21.17■□□□□ 0.98
PABPN1-202ENST00000397276 SCARB1Q8WTV0 552 aa21.17■□□□□ 0.98
PABPN1-202ENST00000397276 C15orf40Q8WUR7 153 aa21.17■□□□□ 0.98
PABPN1-202ENST00000397276 RASL10BQ96S79 203 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms