RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 TMEM9BQ9NQ34 198 aa2.03□□□□□ -2.08
CMC1-202ENST00000396610 HRASLS2Q9NWW9 162 aa2.03□□□□□ -2.08
CMC1-202ENST00000396610 CAMTA1Q9Y6Y1 1673 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 LYRM9A8MSI8 78 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 C9JVG2 144 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 H7C417 338 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 K7EMT4 169 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 LSM1O15116 133 aaKnown RBP2.02□□□□□ -2.09
CMC1-202ENST00000396610 HLA-DQB1P01920 261 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 IGKV4-1P06312 121 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 SLC1A1P43005 524 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 TAS2R31P59538 309 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 MPV17L2Q567V2 206 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 RNASE13Q5GAN3 156 aaKnown RBP2.02□□□□□ -2.09
CMC1-202ENST00000396610 ARMC12Q5T9G4 340 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 PRAMEF20Q5VT98 475 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 UBE2UQ5VVX9 321 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 ZYG11AQ6WRX3 759 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 SLC16A14Q7RTX9 510 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 MIR7-3HGQ8N6C7 128 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 COX18Q8N8Q8 333 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 OR9A2Q8NGT5 310 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 OR13G1Q8NGZ3 307 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 ELMO1Q92556 727 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 SLC38A4Q969I6 547 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 TMEM230Q96A57 120 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 SLC25A46Q96AG3 418 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 HSD17B10Q99714 261 aaKnown RBP2.02□□□□□ -2.09
CMC1-202ENST00000396610 TBL1YQ9BQ87 522 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 CCDC77Q9BR77 488 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 MTFP1Q9UDX5 166 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 PITPNC1Q9UKF7 332 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 SHANK1Q9Y566 2161 aa2.02□□□□□ -2.09
CMC1-202ENST00000396610 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.01□□□□□ -2.09
CMC1-202ENST00000396610 SIRPB1O00241 398 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 CHST10O43529 356 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 CHST1O43916 411 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 SLC22A5O76082 557 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 ARG1P05089 322 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 ZNF688P0C7X2 276 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 U2AF2P26368 475 aaKnown RBP eCLIP2.01□□□□□ -2.095e-7■■■■□ 23.9
CMC1-202ENST00000396610 LOXP28300 417 aaPredicted RBP2.01□□□□□ -2.09
CMC1-202ENST00000396610 CCNG1P51959 295 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 SYNJ2BPP57105 145 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 VSX2P58304 361 aaPredicted RBP2.01□□□□□ -2.09
CMC1-202ENST00000396610 RAB10P61026 200 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 SP4Q02446 784 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 SLC39A6Q13433 755 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 IGFBP7Q16270 282 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 REEP3Q6NUK4 255 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 TMEM256Q8N2U0 113 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 GTPBP8Q8N3Z3 284 aaPredicted RBP2.01□□□□□ -2.09
CMC1-202ENST00000396610 OR4A4PQ8NGN8 299 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 NUBPLQ8TB37 319 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 ACMSDQ8TDX5 336 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 EEF1AKMT3Q96AZ1 226 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 DCPSQ96C86 337 aaKnown RBP2.01□□□□□ -2.09
CMC1-202ENST00000396610 DNAJC1Q96KC8 554 aaKnown RBP2.01□□□□□ -2.09
CMC1-202ENST00000396610 COL21A1Q96P44 957 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 NMRK1Q9NWW6 199 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 LGALS13Q9UHV8 139 aa2.01□□□□□ -2.09
CMC1-202ENST00000396610 SCN1AP35498 2009 aa2□□□□□ -2.09
CMC1-202ENST00000396610 TRAV19A0A0A6YYK7 116 aa2□□□□□ -2.09
CMC1-202ENST00000396610 CENPVL3A0A0U1RRI6 287 aa2□□□□□ -2.09
CMC1-202ENST00000396610 A0A1B0GW55 424 aa2□□□□□ -2.09
CMC1-202ENST00000396610 NCBP2LA6PVI3 153 aaKnown RBP2□□□□□ -2.09
CMC1-202ENST00000396610 H6PDO95479 791 aa2□□□□□ -2.09
CMC1-202ENST00000396610 IGLV3-25P01717 112 aa2□□□□□ -2.09
CMC1-202ENST00000396610 FTH1P02794 183 aa2□□□□□ -2.09
CMC1-202ENST00000396610 CTSLP07711 333 aa2□□□□□ -2.09
CMC1-202ENST00000396610 PABPC4LP0CB38 370 aaKnown RBP2□□□□□ -2.09
CMC1-202ENST00000396610 DUX4L2P0CJ85 424 aa2□□□□□ -2.09
CMC1-202ENST00000396610 DUX4L3P0CJ86 424 aa2□□□□□ -2.09
CMC1-202ENST00000396610 DUX4L5P0CJ88 424 aa2□□□□□ -2.09
CMC1-202ENST00000396610 DUX4L6P0CJ89 424 aa2□□□□□ -2.09
CMC1-202ENST00000396610 DUX4L7P0CJ90 424 aa2□□□□□ -2.09
CMC1-202ENST00000396610 EIF2S2P20042 333 aaKnown RBP2□□□□□ -2.09
CMC1-202ENST00000396610 ME2P23368 584 aa2□□□□□ -2.09
CMC1-202ENST00000396610 EIF3EP60228 445 aaKnown RBP2□□□□□ -2.09
CMC1-202ENST00000396610 STXBP1P61764 594 aaKnown RBP2□□□□□ -2.09
CMC1-202ENST00000396610 TGM3Q08188 693 aa2□□□□□ -2.09
CMC1-202ENST00000396610 CHRNA6Q15825 494 aa2□□□□□ -2.09
CMC1-202ENST00000396610 MRPL23Q16540 153 aaKnown RBP2□□□□□ -2.09
CMC1-202ENST00000396610 TCEAL5Q5H9L2 206 aa2□□□□□ -2.09
CMC1-202ENST00000396610 CCDC183Q5T5S1 534 aa2□□□□□ -2.09
CMC1-202ENST00000396610 C22orf42Q6IC83 251 aa2□□□□□ -2.09
CMC1-202ENST00000396610 NKAIN4Q8IVV8 208 aa2□□□□□ -2.09
CMC1-202ENST00000396610 CMTM1Q8IZ96 169 aa2□□□□□ -2.09
CMC1-202ENST00000396610 NPWQ8N729 165 aa2□□□□□ -2.09
CMC1-202ENST00000396610 C11orf72Q8NBR9 251 aa2□□□□□ -2.09
CMC1-202ENST00000396610 CHST4Q8NCG5 386 aa2□□□□□ -2.09
CMC1-202ENST00000396610 CAPSLQ8WWF8 208 aa2□□□□□ -2.09
CMC1-202ENST00000396610 TCEAL3Q969E4 200 aa2□□□□□ -2.09
CMC1-202ENST00000396610 ANKRA2Q9H9E1 313 aa2□□□□□ -2.09
CMC1-202ENST00000396610 C8orf17Q9NRJ1 99 aa2□□□□□ -2.09
CMC1-202ENST00000396610 DUX4Q9UBX2 424 aa2□□□□□ -2.09
CMC1-202ENST00000396610 ENOPH1Q9UHY7 261 aa2□□□□□ -2.09
CMC1-202ENST00000396610 PALLDQ8WX93 1383 aa1.99□□□□□ -2.09
CMC1-202ENST00000396610 IGKV1-8A0A0C4DH67 115 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms