RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ZNF878C9JN71 531 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 SULT2B1O00204 365 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 EIF1AYO14602 144 aaKnown RBP14.91□□□□□ -0.02
NUP50-202ENST00000396096 DOK2O60496 412 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 LMX1BO60663 402 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 OPN1LWP04000 364 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 AKAIN1P0CW23 69 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 ZNF43P17038 809 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 RAB6AP20340 208 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 HSD11B1P28845 292 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 SSR4P51571 173 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 PSMA6P60900 246 aaKnown RBP14.91□□□□□ -0.02
NUP50-202ENST00000396096 SNRPD2P62316 118 aaKnown RBP14.91□□□□□ -0.02
NUP50-202ENST00000396096 SPOCK1Q08629 439 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 RBMS2Q15434 407 aaKnown RBP14.91□□□□□ -0.02
NUP50-202ENST00000396096 CFAP77Q6ZQR2 320 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 GPAT4Q86UL3 456 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 OR11H4Q8NGC9 324 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 PROK2Q9HC23 129 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 DCDC2BA2VCK2 349 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 B4E171 279 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 GP1BAP07359 652 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 LIFP15018 202 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 SFTPDP35247 375 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 TSPAN7P41732 249 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 ACTBP60709 375 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 ACTG1P63261 375 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 H3F3AP84243 136 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 GALK2Q01415 458 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 GUCA2AQ02747 115 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 ZNF626Q68DY1 528 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 SLC25A25Q6KCM7 469 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 ZNF529Q6P280 563 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 ZNF813Q6ZN06 617 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 CLEC1AQ8NC01 280 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 OR2AJ1Q8NGZ0 328 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 SORCS2Q96PQ0 1159 aa14.91□□□□□ -0.02
NUP50-202ENST00000396096 GPN1Q9HCN4 374 aaPredicted RBP14.91□□□□□ -0.02
NUP50-202ENST00000396096 RAMP1O60894 148 aa14.9□□□□□ -0.02
NUP50-202ENST00000396096 IGHEP01854 428 aa14.9□□□□□ -0.02
NUP50-202ENST00000396096 LPLP06858 475 aa14.9□□□□□ -0.02
NUP50-202ENST00000396096 NR2C1P13056 603 aa14.9□□□□□ -0.02
NUP50-202ENST00000396096 BDKRB2P30411 391 aa14.9□□□□□ -0.02
NUP50-202ENST00000396096 DSCR4P56555 118 aaPredicted RBP14.9□□□□□ -0.02
NUP50-202ENST00000396096 MLF1P58340 268 aa14.9□□□□□ -0.02
NUP50-202ENST00000396096 SIGLEC14Q08ET2 396 aa14.9□□□□□ -0.02
NUP50-202ENST00000396096 MFAP5Q13361 173 aa14.9□□□□□ -0.02
NUP50-202ENST00000396096 JAGN1Q8N5M9 183 aa14.9□□□□□ -0.02
NUP50-202ENST00000396096 OR6N1Q8NGY5 312 aa14.9□□□□□ -0.02
NUP50-202ENST00000396096 FGGYQ96C11 551 aa14.9□□□□□ -0.02
NUP50-202ENST00000396096 SLCO5A1Q9H2Y9 848 aa14.9□□□□□ -0.02
NUP50-202ENST00000396096 SLC39A1Q9NY26 324 aa14.9□□□□□ -0.02
NUP50-202ENST00000396096 ZNF107Q9UII5 783 aaPredicted RBP14.9□□□□□ -0.02
NUP50-202ENST00000396096 ZNF726A6NNF4 738 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 SYT7O43581 403 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 CCL3P10147 92 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 FOLR3P41439 243 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 EIF1AXP47813 144 aaKnown RBP14.89□□□□□ -0.03
NUP50-202ENST00000396096 SELENOPP49908 381 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 CLDN6P56747 220 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 NLRC3Q7RTR2 1065 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 SLC36A1Q7Z2H8 476 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 FAM109AQ8N4B1 249 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 SEH1LQ96EE3 360 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 RADILQ96JH8 1075 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 NKX3-1Q99801 234 aaPredicted RBP14.89□□□□□ -0.03
NUP50-202ENST00000396096 SEC22CQ9BRL7 303 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 CDCP1Q9H5V8 836 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 SEC61A2Q9H9S3 476 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 NSG1A0A0A6YYJ2 146 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 A0A1B0GTI1 187 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 TEX51A0A1B0GUA7 166 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 TLX3O43711 291 aaPredicted RBP14.89□□□□□ -0.03
NUP50-202ENST00000396096 CREBL2O60519 120 aaPredicted RBP14.89□□□□□ -0.03
NUP50-202ENST00000396096 MELTFP08582 738 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 QDPRP09417 244 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 GTF2F2P13984 249 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 ANXA7P20073 488 aaKnown RBP14.89□□□□□ -0.03
NUP50-202ENST00000396096 ACP1P24666 158 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 DNASE1P24855 282 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 ZNF133P52736 654 aaPredicted RBP14.89□□□□□ -0.03
NUP50-202ENST00000396096 GABREP78334 506 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 POU4F3Q15319 338 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 CSRP2Q16527 193 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 RPS19BP1Q86WX3 136 aaKnown RBP14.89□□□□□ -0.03
NUP50-202ENST00000396096 CDH26Q8IXH8 852 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 TMEM229BQ8NBD8 167 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 OR1M1Q8NGA1 313 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 OR4D6Q8NGJ1 314 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 OR1J2Q8NGS2 313 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 UQCC2Q9BRT2 126 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 TMEM138Q9NPI0 162 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 PNRC2Q9NPJ4 139 aaKnown RBP14.89□□□□□ -0.03
NUP50-202ENST00000396096 POLR1DQ9Y2S0 133 aa14.89□□□□□ -0.03
NUP50-202ENST00000396096 G3V3Q6 166 aa14.88□□□□□ -0.03
NUP50-202ENST00000396096 PYCARD-AS1I3L0S3 204 aa14.88□□□□□ -0.03
NUP50-202ENST00000396096 ZIC3O60481 467 aa14.88□□□□□ -0.03
NUP50-202ENST00000396096 EIF1BO60739 113 aaKnown RBP14.88□□□□□ -0.03
NUP50-202ENST00000396096 ALX3O95076 343 aa14.88□□□□□ -0.03
NUP50-202ENST00000396096 TPOP07202 933 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms