RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 CATSPERDQ86XM0 798 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 C4orf45Q96LM5 186 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 CNTNAP3BQ96NU0 1288 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 COQ7Q99807 217 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 SFXN3Q9BWM7 321 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 CNTNAP3Q9BZ76 1288 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 OR2H1Q9GZK4 316 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 COMMD4Q9H0A8 199 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 HDHD2Q9H0R4 259 aa17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 OPN3Q9H1Y3 402 aaPredicted RBP17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 TXNL4BQ9NX01 149 aaKnown RBP17.87■□□□□ 0.45
VCPKMT-202ENST00000395860 PRKXP51817 358 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 PSG4Q00888 419 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 GALK2Q01415 458 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 C22orf42Q6IC83 251 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 ZNF610Q8N9Z0 462 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 ABHD4Q8TB40 342 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 NDNFQ8TB73 568 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 KCNJ15Q99712 375 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 DCUN1D5Q9BTE7 237 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 BRD7Q9NPI1 651 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 ZNF224Q9NZL3 707 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 GSTK1Q9Y2Q3 226 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 ZNF281Q9Y2X9 895 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 SHANK1Q9Y566 2161 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 TMEM212A6NML5 194 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 OR4C45A6NMZ5 311 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 SERPINA3P01011 423 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 MMP7P09237 267 aaPredicted RBP17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 GALP22466 123 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 KIR3DL2P43630 455 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 MMP16P51512 607 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 CASP6P55212 293 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 PSMA6P60900 246 aaKnown RBP17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 INSL4Q14641 139 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 ODF4Q2M2E3 257 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 ZNF774Q6NX45 483 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 ZNF283Q8N7M2 679 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 ZNF676Q8N7Q3 588 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 AKR7LQ8NHP1 331 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 BCL2L2Q92843 193 aaPredicted RBP17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 DCLRE1CQ96SD1 692 aaKnown RBP17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 GALNT8Q9NY28 637 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 OR52A1Q9UKL2 312 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 SLC22A13Q9Y226 551 aa17.86■□□□□ 0.45
VCPKMT-202ENST00000395860 CIB4A0PJX0 185 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 TRIM64BA6NI03 449 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 SYNGR3O43761 229 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 RAD51DO75771 328 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 LYZL6O75951 148 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 HLA-HP01893 362 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 CD79AP11912 226 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 FGF9P31371 208 aaPredicted RBP17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 CX3CR1P49238 355 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 ECH1Q13011 328 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 ST3GAL2Q16842 350 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 HIKESHIQ53FT3 197 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 YIF1BQ5BJH7 314 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 TMEM91Q6ZNR0 172 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 BEND4Q6ZU67 534 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 USP43Q70EL4 1123 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 GABRG1Q8N1C3 465 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 KBTBD8Q8NFY9 601 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 OR13C5Q8NGS8 318 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 OR1F12Q8NHA8 337 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 WNT5BQ9H1J7 359 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 G6PC2Q9NQR9 355 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 FAM206AQ9NX38 181 aa17.85■□□□□ 0.45
VCPKMT-202ENST00000395860 F5H5K5 113 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 PCSK6P29122 969 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 OPRM1P35372 400 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 SERPINB10P48595 397 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 TBRG1Q3YBR2 411 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 PABPC1L2AQ5JQF8 200 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 BCL2L15Q5TBC7 163 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 ALDH16A1Q8IZ83 802 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 ZNF433Q8N7K0 673 aaPredicted RBP17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 IL17RDQ8NFM7 739 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 NANOS1Q8WY41 292 aaKnown RBP17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 SPTSSAQ969W0 71 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 PPP1R14AQ96A00 147 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 DCSTAMPQ9H295 470 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 TRGV8A0A0C4DH27 118 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 A0A0G2JNJ9 132 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 UBL3O95164 117 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 COX5AP20674 150 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 ARR3P36575 388 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 HTR5AP47898 357 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 ZNF121P58317 390 aaPredicted RBP17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 RPS11P62280 158 aaKnown RBP eCLIP17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 ACSM3Q53FZ2 586 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 TMEM53Q6P2H8 277 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 DPPA2Q7Z7J5 298 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 SLC7A6Q92536 515 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 KCTD7Q96MP8 289 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 MOB1AQ9H8S9 216 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 PTTG2Q9NZH5 202 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 Q9UFV3 132 aa17.84■□□□□ 0.45
VCPKMT-202ENST00000395860 APOC1P02654 83 aa17.83■□□□□ 0.44
VCPKMT-202ENST00000395860 ZNF182P17025 639 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms