RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 C9orf62Q8N4C0 152 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 BEX1Q9HBH7 125 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 NOX3Q9HBY0 568 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 SH2D2AQ9NP31 389 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 CGGBP1Q9UFW8 167 aaPredicted RBP16.53■□□□□ 0.24
SIL1-202ENST00000394817 GDF2Q9UK05 429 aaPredicted RBP16.53■□□□□ 0.24
SIL1-202ENST00000394817 HSPB11Q9Y547 144 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 MRPS18BQ9Y676 258 aaKnown RBP16.53■□□□□ 0.24
SIL1-202ENST00000394817 TRAV18A0A075B6X5 111 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 A6NL46 340 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 SULT2B1O00204 365 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 LDLRAD4O15165 306 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 SSNA1O43805 119 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 LMX1BO60663 402 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 RAMP1O60894 148 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 PMS2P2O95744 297 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 CCL3P10147 92 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 GABRA1P14867 456 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 SSBP1Q04837 148 aaKnown RBP16.53■□□□□ 0.24
SIL1-202ENST00000394817 TMPPEQ6ZT21 453 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 RHOUQ7L0Q8 258 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 LUZP2Q86TE4 346 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 PAQR8Q8TEZ7 354 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 NKX3-1Q99801 234 aaPredicted RBP16.53■□□□□ 0.24
SIL1-202ENST00000394817 ATG5Q9H1Y0 275 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 PROK2Q9HC23 129 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 SLC39A1Q9NY26 324 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 NPTNQ9Y639 398 aa16.53■□□□□ 0.24
SIL1-202ENST00000394817 ZNF878C9JN71 531 aa16.52■□□□□ 0.23
SIL1-202ENST00000394817 CDX4O14627 284 aaPredicted RBP16.52■□□□□ 0.23
SIL1-202ENST00000394817 ICMTO60725 284 aa16.52■□□□□ 0.23
SIL1-202ENST00000394817 FOLR3P41439 243 aa16.52■□□□□ 0.23
SIL1-202ENST00000394817 CLDN6P56747 220 aa16.52■□□□□ 0.23
SIL1-202ENST00000394817 ZP1P60852 638 aa16.52■□□□□ 0.23
SIL1-202ENST00000394817 PSMA6P60900 246 aaKnown RBP16.52■□□□□ 0.23
SIL1-202ENST00000394817 SPOCK1Q08629 439 aa16.52■□□□□ 0.23
SIL1-202ENST00000394817 ARMC10Q8N2F6 343 aa16.52■□□□□ 0.23
SIL1-202ENST00000394817 PBOV1Q9GZY1 135 aa16.52■□□□□ 0.23
SIL1-202ENST00000394817 MOB1AQ9H8S9 216 aa16.52■□□□□ 0.23
SIL1-202ENST00000394817 RHBDD3Q9Y3P4 386 aa16.52■□□□□ 0.23
SIL1-202ENST00000394817 NSG1A0A0A6YYJ2 146 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 DCDC2BA2VCK2 349 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 B4E171 279 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 AKR7A2O43488 359 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 CD59P13987 128 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 LIFP15018 202 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 PRSS3P35030 304 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 TSPAN7P41732 249 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 MFAP5Q13361 173 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 KCNMB1Q16558 191 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 GLDNQ6ZMI3 551 aaPredicted RBP16.51■□□□□ 0.23
SIL1-202ENST00000394817 CREB3L2Q70SY1 520 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 OR4C16Q8NGL9 310 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 PTX4Q96A99 478 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 FOXRED1Q96CU9 486 aaPredicted RBP16.51■□□□□ 0.23
SIL1-202ENST00000394817 MED30Q96HR3 178 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 CDCP1Q9H5V8 836 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 POLR1DQ9Y2S0 133 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 A0A0A6YYH2 397 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 A6NJ64 397 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 KLK2P20151 261 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 CAPZA1P52907 286 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 DSCR4P56555 118 aaPredicted RBP16.51■□□□□ 0.23
SIL1-202ENST00000394817 MLF1P58340 268 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 SNRPD2P62316 118 aaKnown RBP16.51■□□□□ 0.23
SIL1-202ENST00000394817 H3F3AP84243 136 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 GUCA2AQ02747 115 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 CCDC92Q53HC0 331 aaPredicted RBP16.51■□□□□ 0.23
SIL1-202ENST00000394817 JAGN1Q8N5M9 183 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 GPX8Q8TED1 209 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 SEC61A2Q9H9S3 476 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 ZNF160Q9HCG1 818 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 DLL4Q9NR61 685 aa16.51■□□□□ 0.23
SIL1-202ENST00000394817 PMS2P1A4D2B8 440 aa16.5■□□□□ 0.23
SIL1-202ENST00000394817 SULT1C2O00338 296 aa16.5■□□□□ 0.23
SIL1-202ENST00000394817 IL5P05113 134 aa16.5■□□□□ 0.23
SIL1-202ENST00000394817 CDAP32320 146 aa16.5■□□□□ 0.23
SIL1-202ENST00000394817 RBMS2Q15434 407 aaKnown RBP16.5■□□□□ 0.23
SIL1-202ENST00000394817 CARD17Q5XLA6 110 aa16.5■□□□□ 0.23
SIL1-202ENST00000394817 SLC25A25Q6KCM7 469 aa16.5■□□□□ 0.23
SIL1-202ENST00000394817 ZNF813Q6ZN06 617 aa16.5■□□□□ 0.23
SIL1-202ENST00000394817 Q6ZTK2 550 aa16.5■□□□□ 0.23
SIL1-202ENST00000394817 RPS19BP1Q86WX3 136 aaKnown RBP16.5■□□□□ 0.23
SIL1-202ENST00000394817 OR2AJ1Q8NGZ0 328 aa16.5■□□□□ 0.23
SIL1-202ENST00000394817 SORCS2Q96PQ0 1159 aa16.5■□□□□ 0.23
SIL1-202ENST00000394817 NPDC1Q9NQX5 325 aaPredicted RBP16.5■□□□□ 0.23
SIL1-202ENST00000394817 CACNA1HO95180 2353 aa16.49■□□□□ 0.23
SIL1-202ENST00000394817 ZNF726A6NNF4 738 aa16.49■□□□□ 0.23
SIL1-202ENST00000394817 SYT7O43581 403 aa16.49■□□□□ 0.23
SIL1-202ENST00000394817 GALR2O43603 387 aaPredicted RBP16.49■□□□□ 0.23
SIL1-202ENST00000394817 IGHEP01854 428 aa16.49■□□□□ 0.23
SIL1-202ENST00000394817 QDPRP09417 244 aa16.49■□□□□ 0.23
SIL1-202ENST00000394817 CPN1P15169 458 aa16.49■□□□□ 0.23
SIL1-202ENST00000394817 HSD11B1P28845 292 aa16.49■□□□□ 0.23
SIL1-202ENST00000394817 RAD52P43351 418 aa16.49■□□□□ 0.23
SIL1-202ENST00000394817 ACTBP60709 375 aa16.49■□□□□ 0.23
SIL1-202ENST00000394817 ACTG1P63261 375 aa16.49■□□□□ 0.23
SIL1-202ENST00000394817 ZNF782Q6ZMW2 699 aaPredicted RBP16.49■□□□□ 0.23
SIL1-202ENST00000394817 TMEM156Q8N614 296 aa16.49■□□□□ 0.23
SIL1-202ENST00000394817 ZNF431Q8TF32 576 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms