RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 S100A11P31949 105 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 SLC26A5P58743 744 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 SLC26A10Q8NG04 563 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 ST7LQ8TDW4 575 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 CCDC74BQ96LY2 380 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 WDR13Q9H1Z4 485 aa12.03□□□□□ -0.48
GTF2F1-201ENST00000394456 EXPH5Q8NEV8 1989 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 hCG_1807616A0A1W2PRN6 198 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 C19orf67A6NJJ6 358 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 EIF4E2O60573 245 aaKnown RBP12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 ZNF735P0CB33 412 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 SLC2A1P11166 492 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 DNASE1L1P49184 302 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 DCAF7P61962 342 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 PMPCAQ10713 525 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 ATXN7L3Q14CW9 347 aaPredicted RBP12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 TUSC1Q2TAM9 212 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 NKAIN1Q4KMZ8 207 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 GRINAQ7Z429 371 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 FGGYQ96C11 551 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 SEC22AQ96IW7 307 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 MNTQ99583 582 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 RABL2AQ9UBK7 228 aaPredicted RBP12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 OR52A1Q9UKL2 312 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 RABL2BQ9UNT1 228 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 SRPK3Q9UPE1 567 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 BDP1A6H8Y1 2624 aa12.02□□□□□ -0.48
GTF2F1-201ENST00000394456 TMEM269A0A1B0GVZ9 245 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 NUPL2O15504 423 aaKnown RBP12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 RLN2P04090 185 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 OR4E1P0C645 316 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 ACHEP22303 614 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 FAUP35544 74 aaKnown RBP12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 RNF4P78317 190 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 RSPO4Q2I0M5 234 aaPredicted RBP12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 ATPAF1Q5TC12 328 aaPredicted RBP12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 RGS7BPQ6MZT1 257 aaPredicted RBP12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 FAM219AQ8IW50 185 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 OR13C8Q8NGS7 320 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 NUDCD2Q8WVJ2 157 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 MRGPRFQ96AM1 343 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 ZC3H10Q96K80 434 aaKnown RBP12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 C12orf10Q9HB07 376 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 RHBDD3Q9Y3P4 386 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 MT-ATP6P00846 226 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 ITGB2P05107 769 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 HEXBP07686 556 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 GABRA1P14867 456 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 ACY1Q03154 408 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 GLO1Q04760 184 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 FOXF1Q12946 379 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 MFAP5Q13361 173 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 PHF19Q5T6S3 580 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 PLPP5Q8NEB5 264 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 OR52N4Q8NGI2 321 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 ASB10Q8WXI3 467 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 ASB17Q8WXJ9 295 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 EDAQ92838 391 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 ADAT3Q96EY9 351 aaPredicted RBP12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 CNTD2Q9H8S5 307 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 R4GMQ9 66 aa12.02□□□□□ -0.49
GTF2F1-201ENST00000394456 A0A1W2PQD3 144 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 TMEM82A0PJX8 343 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 MFSD2BA6NFX1 497 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 PHYHO14832 338 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 TO15178 435 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 CDAP32320 146 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 PNLIPRP2P54317 469 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 ZNF660Q6AZW8 331 aaPredicted RBP12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 RALGAPA1Q6GYQ0 2036 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 LCN10Q6JVE6 187 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 KCTD18Q6PI47 426 aaPredicted RBP12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 PAQR4Q8N4S7 273 aaPredicted RBP12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 APCDD1LQ8NCL9 501 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 OR10S1Q8NGN2 331 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 AKIRIN1Q9H9L7 192 aaPredicted RBP12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 RARRES3Q9UL19 164 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 TOX3O15405 576 aaPredicted RBP12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 UNC119Q13432 240 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 ZMYND11Q15326 602 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 GLT8D1Q68CQ7 371 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 RABEPKQ7Z6M1 372 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 ANKRD37Q7Z713 158 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 GPAT4Q86UL3 456 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 BOLLQ8N9W6 283 aaKnown RBP12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 OCIAD1Q9NX40 245 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 VSIG4Q9Y279 399 aa12.01□□□□□ -0.49
GTF2F1-201ENST00000394456 PHF3Q92576 2039 aaKnown RBP12□□□□□ -0.49
GTF2F1-201ENST00000394456 C5orf63A6NC05 138 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 ZNF814B7Z6K7 855 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 NPIPA5E9PKD4 350 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 LDLRAD4O15165 306 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 LAMTOR5O43504 91 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 RAMP1O60894 148 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 TDGF1P13385 188 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 ZNF823P16415 610 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 GNALP38405 381 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 CARD17Q5XLA6 110 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 BPIFB2Q8N4F0 458 aa12□□□□□ -0.49
GTF2F1-201ENST00000394456 CHST4Q8NCG5 386 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms