RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 CHST4Q8NCG5 386 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 PAQR8Q8TEZ7 354 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 ZBTB8AQ96BR9 441 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 ZNF837Q96EG3 531 aaPredicted RBP9.89□□□□□ -0.83
TCOF1-203ENST00000394269 ANGPTL4Q9BY76 406 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 LRFN1Q9P244 771 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 HDGFL3Q9Y3E1 203 aa9.89□□□□□ -0.83
TCOF1-203ENST00000394269 AKAP6Q13023 2319 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 B4E171 279 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 CXCL13O43927 109 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 TNFSF15O95150 251 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 IGHMP01871 453 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 RAF1P04049 648 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 CD1AP06126 327 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 CD59P13987 128 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 MNDAP41218 407 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 TSPAN7P41732 249 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 TGIF1Q15583 401 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 PCGF3Q3KNV8 242 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 C9orf135Q5VTT2 229 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 GTPBP8Q8N3Z3 284 aaPredicted RBP9.88□□□□□ -0.83
TCOF1-203ENST00000394269 FADS6Q8N9I5 356 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 NAXEQ8NCW5 288 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 SMIM4Q8WVI0 70 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 MIB2Q96AX9 1013 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 MARVELD1Q9BSK0 173 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 PBOV1Q9GZY1 135 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 DIABLOQ9NR28 239 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 IL17BQ9UHF5 180 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 ELF5Q9UKW6 265 aaPredicted RBP9.88□□□□□ -0.83
TCOF1-203ENST00000394269 LHFPL6Q9Y693 200 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 ARID1AO14497 2285 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 NUP210LQ5VU65 1888 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 FAM166BA8MTA8 275 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 MT-CO3P00414 261 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 HTR2CP28335 458 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 PTH2RP49190 550 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 CARD18P57730 90 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 RIN1Q13671 783 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 FCN2Q15485 313 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 ATP1A1-AS1Q5TC04 95 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 ASPHD2Q6ICH7 369 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 ACBD4Q8NC06 268 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 SLC25A43Q8WUT9 341 aaPredicted RBP9.88□□□□□ -0.83
TCOF1-203ENST00000394269 ZNF416Q9BWM5 594 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 MRPL13Q9BYD1 178 aaKnown RBP9.88□□□□□ -0.83
TCOF1-203ENST00000394269 ZCCHC4Q9H5U6 513 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 G6PC2Q9NQR9 355 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 CYB5R1Q9UHQ9 305 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 LOC100509620A0A075B734 347 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 TRBV5-7A0A0A0MS05 114 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 A0A1W2PNU3 283 aaPredicted RBP9.88□□□□□ -0.83
TCOF1-203ENST00000394269 AQP7P3A6NL99 342 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 DKK1O94907 266 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 RLN1P04808 185 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 ACSM4P0C7M7 580 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 ICAM2P13598 275 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 CCR9P51686 369 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 SSPNQ14714 243 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 PHYHD1Q5SRE7 291 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 HES3Q5TGS1 186 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 SLC25A25Q6KCM7 469 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 OR10S1Q8NGN2 331 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 HAVCR1Q96D42 359 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 PIGQQ9BRB3 760 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 CHIAQ9BZP6 476 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 ING3Q9NXR8 418 aa9.88□□□□□ -0.83
TCOF1-203ENST00000394269 A0A1B0GVI7 797 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 TOXO94900 526 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 H2AFB2P0C5Z0 115 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 ANOS1P23352 680 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 BTCP35070 178 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 MAP2K6P52564 334 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 ZNF121P58317 390 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-203ENST00000394269 PLA1AQ53H76 456 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 CHMP1BQ7LBR1 199 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 FGD2Q7Z6J4 655 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 OR5D18Q8NGL1 313 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 RNF133Q8WVZ7 376 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 SRXN1Q9BYN0 137 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 DEPPQ9NTK1 212 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 GLTPQ9NZD2 209 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 SMAD9O15198 467 aaKnown RBP9.87□□□□□ -0.83
TCOF1-203ENST00000394269 RBBP9O75884 186 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 FAM157BP0CG42 384 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 ZNF20P17024 532 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 VEGFCP49767 419 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 P2RY4P51582 365 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 C6orf183Q5T699 404 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 ABHD17BQ5VST6 288 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 ZNF704Q6ZNC4 412 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-203ENST00000394269 ZNF101Q8IZC7 436 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 OR52N4Q8NGI2 321 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 AKAP1Q92667 903 aaKnown RBP eCLIP9.87□□□□□ -0.83
TCOF1-203ENST00000394269 CREB3L1Q96BA8 519 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 ADAT3Q96EY9 351 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-203ENST00000394269 SGCZQ96LD1 299 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 ALKBH3Q96Q83 286 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-203ENST00000394269 GPER1Q99527 375 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 ULBP2Q9BZM5 246 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms