RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 TRAV17A0A0B4J275 112 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 LOC107986453A0A1B0GWG9 222 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 FAM25AB3EWG3 89 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 FAM25CB3EWG5 89 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 FAM25GB3EWG6 89 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 CD2P06729 351 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 ADRA2CP18825 462 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 AZGP1P25311 298 aaKnown RBP10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 CTSSP25774 331 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 NHLH1Q02575 133 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 TAF13Q15543 124 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 THOC7Q6I9Y2 204 aaKnown RBP10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 ZNF433Q8N7K0 673 aaPredicted RBP10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 ZNF837Q96EG3 531 aaPredicted RBP10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 PBOV1Q9GZY1 135 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 DEFB127Q9H1M4 99 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 LDAHQ9H6V9 325 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 CRLF2Q9HC73 371 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 C14orf119Q9NWQ9 140 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 EXTL2Q9UBQ6 330 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 NUFIP1Q9UHK0 495 aaKnown RBP10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 FOXJ3Q9UPW0 622 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 TTLL8A6PVC2 850 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 EFSO43281 561 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 APOA1P02647 267 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 TTRP02766 147 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 EIF4EP06730 217 aaKnown RBP10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 IL7P13232 177 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 CPN1P15169 458 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 FSTP19883 344 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 CFPP27918 469 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 TALDO1P37837 337 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 DEFA1P59665 94 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 DEFA3P59666 94 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 BAK1Q16611 211 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 PYDC2Q56P42 97 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 OR5H6Q8NGV6 325 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 SETD6Q8TBK2 473 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 SP140LQ9H930 580 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 BCO1Q9HAY6 547 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 BRD7Q9NPI1 651 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 TMEM38BQ9NVV0 291 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 NOSIPQ9Y314 301 aaKnown RBP10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 ZNF724A8MTY0 619 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 H3BSH0 61 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 MAGEB3O15480 346 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 PTTG1O95997 202 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 ACSM4P0C7M7 580 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 SNRPBP14678 240 aaKnown RBP10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 ARPC4P59998 168 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 IL18Q14116 193 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 ASPHD2Q6ICH7 369 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 POC5Q8NA72 575 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 ALKBH3Q96Q83 286 aaPredicted RBP10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 LINC00470Q9BZP3 86 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 FAIMQ9NVQ4 179 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 PARPBPQ9NWS1 579 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 SPRR3Q9UBC9 169 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 KLK13Q9UKR3 277 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 CUL9Q8IWT3 2517 aa10.08□□□□□ -0.8
SMARCAL1-203ENST00000392128 hCG_2014768A0A024R1R8 64 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 A0A0B4J203 849 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 ANXA2P2A6NMY6 339 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 MRPL33O75394 65 aaKnown RBP10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 MTRF1O75570 445 aaKnown RBP10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 IGHG3P01860 377 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 MAS1P04201 325 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 ANXA2P07355 339 aaKnown RBP10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 CST2P09228 141 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 CSF3P09919 207 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 IGFBP3P17936 291 aaPredicted RBP10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 RNPS1Q15287 305 aaKnown RBP10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 P2RY14Q15391 338 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 STK11Q15831 433 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 HES5Q5TA89 166 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 LINGO2Q7L985 606 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 LRRC18Q8N456 261 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 OR4M1Q8NGD0 313 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 OR13C3Q8NGS6 347 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 ZNF671Q8TAW3 534 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 FNDC9Q8TBE3 224 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 LGALS14Q8TCE9 139 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 WDYHV1Q96HA8 205 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 KCNJ15Q99712 375 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 SLCO5A1Q9H2Y9 848 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 EXO5Q9H790 373 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 GPR35Q9HC97 309 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 CKLFQ9UBR5 152 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 CFAP47Q6ZTR5 3102 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 OR6C65A6NJZ3 312 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 P2RY10O00398 339 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 TFECO14948 347 aaPredicted RBP10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 CALCBP10092 127 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 CX3CR1P49238 355 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 SCAND1P57086 179 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 ZNF121P58317 390 aaPredicted RBP10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 PMP22Q01453 160 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 SCN1BQ07699 218 aa10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 RSPO4Q2I0M5 234 aaPredicted RBP10.07□□□□□ -0.8
SMARCAL1-203ENST00000392128 NRN1LQ496H8 165 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms