RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 TGIF1Q15583 401 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 MARCH1Q8TCQ1 289 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 SPOCK3Q9BQ16 436 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 CNTD2Q9H8S5 307 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 PRMT8Q9NR22 394 aaPredicted RBP16.13■□□□□ 0.17
ERCC2-201ENST00000391941 OBP2AQ9NY56 170 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 A0A1B0GW55 424 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 LOC107986453A0A1B0GWG9 222 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 DUX4L2P0CJ85 424 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 DUX4L3P0CJ86 424 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 DUX4L4P0CJ87 422 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 DUX4L5P0CJ88 424 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 DUX4L6P0CJ89 424 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 DUX4L7P0CJ90 424 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 PVALBP20472 110 aaPredicted RBP16.13■□□□□ 0.17
ERCC2-201ENST00000391941 NTSR1P30989 418 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 HHEXQ03014 270 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 ELOCQ15369 112 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 RNASE10Q5GAN6 216 aaKnown RBP16.13■□□□□ 0.17
ERCC2-201ENST00000391941 TMEM240Q5SV17 173 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 H3F3CQ6NXT2 135 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 ZNF679Q8IYX0 411 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 ARMC10Q8N2F6 343 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 OR52N4Q8NGI2 321 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 MAFIPQ8WZ33 124 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 SLC25A21Q9BQT8 299 aaPredicted RBP16.13■□□□□ 0.17
ERCC2-201ENST00000391941 SLC22A11Q9NSA0 550 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 DUX4Q9UBX2 424 aa16.13■□□□□ 0.17
ERCC2-201ENST00000391941 A0A1W2PP11 408 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 C9orf170A2RU37 121 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 OR14I1A6ND48 311 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 ZNF208O43345 1280 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 MELTFP08582 738 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 SPP1P10451 314 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 CFPP27918 469 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 SERPINF1P36955 418 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 INPP5JQ15735 1006 aaPredicted RBP16.12■□□□□ 0.17
ERCC2-201ENST00000391941 CDCP2Q5VXM1 449 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 ARHGEF39Q8N4T4 335 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 TMEM229BQ8NBD8 167 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 OR4A4PQ8NGN8 299 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 ASB13Q8WXK3 278 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 FGGYQ96C11 551 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 NUDT9Q9BW91 350 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 STK17BO94768 372 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 HOXC4P09017 264 aaPredicted RBP16.12■□□□□ 0.17
ERCC2-201ENST00000391941 SLC2A1P11166 492 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 ZBTB25P24278 435 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 CXCR1P25024 350 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.12■□□□□ 0.17
ERCC2-201ENST00000391941 FNDC7Q5VTL7 733 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 SHISA6Q6ZSJ9 500 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 ACOT7LQ6ZUV0 252 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 ZNF440Q8IYI8 595 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 GTPBP8Q8N3Z3 284 aaPredicted RBP16.12■□□□□ 0.17
ERCC2-201ENST00000391941 DEFB119Q8N690 84 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 OR5AP2Q8NGF4 316 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 NUBPLQ8TB37 319 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 UBQLN4Q9NRR5 601 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 CKLFQ9UBR5 152 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 PCDH15Q96QU1 1955 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 ARRB1P49407 418 aaPredicted RBP16.12■□□□□ 0.17
ERCC2-201ENST00000391941 PNLIPRP2P54317 469 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 EMC4Q5J8M3 183 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 INO80EQ8NBZ0 244 aaPredicted RBP16.12■□□□□ 0.17
ERCC2-201ENST00000391941 THAP6Q8TBB0 222 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 MRGPRX1Q96LB2 322 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 SLC17A5Q9NRA2 495 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 MKL2Q9ULH7 1088 aa16.12■□□□□ 0.17
ERCC2-201ENST00000391941 PRSS37A4D1T9 235 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 SHISA8B8ZZ34 492 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 H0YIZ8 118 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 NPY4RP50391 375 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 EFNA3P52797 238 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 SSBP1Q04837 148 aaKnown RBP16.11■□□□□ 0.17
ERCC2-201ENST00000391941 UNC119Q13432 240 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 SLC18B1Q6NT16 456 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 COX15Q7KZN9 410 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 SLC29A4Q7RTT9 530 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 DCXRQ7Z4W1 244 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 OOSP2Q86WS3 158 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 RNF128Q8TEB7 428 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 DUSP15Q9H1R2 295 aaPredicted RBP16.11■□□□□ 0.17
ERCC2-201ENST00000391941 FLI1Q01543 452 aaPredicted RBP16.11■□□□□ 0.17
ERCC2-201ENST00000391941 SCRN3Q0VDG4 424 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 FUT7Q11130 342 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 RSPO4Q2I0M5 234 aaPredicted RBP16.11■□□□□ 0.17
ERCC2-201ENST00000391941 TMEM92Q6UXU6 159 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 ADGRE4PQ86SQ3 457 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 C8orf44Q96CB5 159 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 EMC6Q9BV81 110 aa16.11■□□□□ 0.17
ERCC2-201ENST00000391941 GFERP55789 205 aa16.1■□□□□ 0.17
ERCC2-201ENST00000391941 LYG2Q86SG7 212 aa16.1■□□□□ 0.17
ERCC2-201ENST00000391941 PAQR4Q8N4S7 273 aaPredicted RBP16.1■□□□□ 0.17
ERCC2-201ENST00000391941 C19orf47Q8N9M1 422 aaKnown RBP16.1■□□□□ 0.17
ERCC2-201ENST00000391941 ZSCAN4Q8NAM6 433 aaPredicted RBP16.1■□□□□ 0.17
ERCC2-201ENST00000391941 OR51F2Q8NH61 342 aa16.1■□□□□ 0.17
ERCC2-201ENST00000391941 NUDT22Q9BRQ3 303 aa16.1■□□□□ 0.17
ERCC2-201ENST00000391941 MED29Q9NX70 200 aa16.1■□□□□ 0.17
ERCC2-201ENST00000391941 CYB5R1Q9UHQ9 305 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms