RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 POLR1DQ9Y2S0 133 aa10.99□□□□□ -0.65
RPAIN-202ENST00000381208 LOC105371242A0A075B767 164 aa10.98□□□□□ -0.65
RPAIN-202ENST00000381208 UNC119BA6NIH7 251 aa10.98□□□□□ -0.65
RPAIN-202ENST00000381208 SNX3O60493 162 aa10.98□□□□□ -0.65
RPAIN-202ENST00000381208 SCG5P05408 212 aa10.98□□□□□ -0.65
RPAIN-202ENST00000381208 ZNF26P17031 533 aaPredicted RBP10.98□□□□□ -0.65
RPAIN-202ENST00000381208 FUT4P22083 530 aa10.98□□□□□ -0.65
RPAIN-202ENST00000381208 COMPP49747 757 aaPredicted RBP10.98□□□□□ -0.65
RPAIN-202ENST00000381208 TMEM255AQ5JRV8 349 aa10.98□□□□□ -0.65
RPAIN-202ENST00000381208 SMARCD3Q6STE5 483 aa10.98□□□□□ -0.65
RPAIN-202ENST00000381208 MUC20Q8N307 709 aaPredicted RBP10.98□□□□□ -0.65
RPAIN-202ENST00000381208 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.98□□□□□ -0.65
RPAIN-202ENST00000381208 APOBEC3DQ96AK3 386 aaPredicted RBP10.98□□□□□ -0.65
RPAIN-202ENST00000381208 MCUR1Q96AQ8 359 aa10.98□□□□□ -0.65
RPAIN-202ENST00000381208 CMBLQ96DG6 245 aa10.98□□□□□ -0.65
RPAIN-202ENST00000381208 COQ7Q99807 217 aa10.98□□□□□ -0.65
RPAIN-202ENST00000381208 C7orf69Q9H7B7 122 aa10.98□□□□□ -0.65
RPAIN-202ENST00000381208 NTN4Q9HB63 628 aa10.98□□□□□ -0.65
RPAIN-202ENST00000381208 UBAP1Q9NZ09 502 aa10.98□□□□□ -0.65
RPAIN-202ENST00000381208 COA3Q9Y2R0 106 aaPredicted RBP10.98□□□□□ -0.65
RPAIN-202ENST00000381208 POLR3KQ9Y2Y1 108 aaPredicted RBP10.98□□□□□ -0.65
RPAIN-202ENST00000381208 IER3IP1Q9Y5U9 82 aa10.98□□□□□ -0.65
RPAIN-202ENST00000381208 ARPC3O15145 178 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 IGHV2-70P01814 119 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 NCK1P16333 377 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 SELEP16581 610 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 ADRA2CP18825 462 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 SLC6A6P31641 620 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 ACTG1P63261 375 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 SLC36A3Q495N2 470 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 FBXW12Q6X9E4 464 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 C1orf229Q6ZS94 237 aaPredicted RBP10.97□□□□□ -0.65
RPAIN-202ENST00000381208 TSEN54Q7Z6J9 526 aaKnown RBP10.97□□□□□ -0.65
RPAIN-202ENST00000381208 LRRC28Q86X40 367 aaPredicted RBP10.97□□□□□ -0.65
RPAIN-202ENST00000381208 BPIFB2Q8N4F0 458 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 OR2Z1Q8NG97 314 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 OR13G1Q8NGZ3 307 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 POP5Q969H6 163 aaKnown RBP10.97□□□□□ -0.65
RPAIN-202ENST00000381208 ZMYND19Q96E35 227 aaPredicted RBP10.97□□□□□ -0.65
RPAIN-202ENST00000381208 C7orf34Q96L11 122 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 NUAK2Q9H093 628 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 MYLK2Q9H1R3 596 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 RERGLQ9H628 205 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 PATZ1Q9HBE1 687 aaKnown RBP10.97□□□□□ -0.65
RPAIN-202ENST00000381208 ADA2Q9NZK5 511 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 EGFL7Q9UHF1 273 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 MAGEL2Q9UJ55 1249 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 PPP1R3CQ9UQK1 317 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 STARD10Q9Y365 291 aa10.97□□□□□ -0.65
RPAIN-202ENST00000381208 TRBV4-1A0A0J9YWV2 114 aa10.96□□□□□ -0.65
RPAIN-202ENST00000381208 SOCS2O14508 198 aa10.96□□□□□ -0.65
RPAIN-202ENST00000381208 IDH3BO43837 385 aa10.96□□□□□ -0.65
RPAIN-202ENST00000381208 RENP00797 406 aa10.96□□□□□ -0.65
RPAIN-202ENST00000381208 SBK2P0C263 348 aa10.96□□□□□ -0.65
RPAIN-202ENST00000381208 MDH2P40926 338 aaKnown RBP10.96□□□□□ -0.65
RPAIN-202ENST00000381208 BTG1P62324 171 aa10.96□□□□□ -0.65
RPAIN-202ENST00000381208 ECH1Q13011 328 aa10.96□□□□□ -0.65
RPAIN-202ENST00000381208 RFX4Q33E94 735 aa10.96□□□□□ -0.65
RPAIN-202ENST00000381208 SPATS1Q496A3 300 aa10.96□□□□□ -0.65
RPAIN-202ENST00000381208 CCDC92Q53HC0 331 aaPredicted RBP10.96□□□□□ -0.65
RPAIN-202ENST00000381208 JAZF1Q86VZ6 243 aa10.96□□□□□ -0.65
RPAIN-202ENST00000381208 CCDC197Q8NCU1 140 aa10.96□□□□□ -0.65
RPAIN-202ENST00000381208 PYURFQ96I23 114 aa10.96□□□□□ -0.65
RPAIN-202ENST00000381208 ZNF582Q96NG8 517 aaPredicted RBP10.96□□□□□ -0.65
RPAIN-202ENST00000381208 A8MXK9 166 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 RER1O15258 196 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 GADD45GO95257 159 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 FSTL3O95633 263 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 HSD17B1P14061 328 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 FPR3P25089 353 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 NOS3P29474 1203 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 CDKN2AP42771 156 aaKnown RBP10.95□□□□□ -0.66
RPAIN-202ENST00000381208 CENPAP49450 140 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 SRP9P49458 86 aaKnown RBP10.95□□□□□ -0.66
RPAIN-202ENST00000381208 HIST1H3AP68431 136 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 LCN2P80188 198 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 COX10Q12887 443 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 ESCO2Q56NI9 601 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 SAMD4BQ5PRF9 694 aaKnown RBP10.95□□□□□ -0.66
RPAIN-202ENST00000381208 HIST2H3PS2Q5TEC6 136 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 C1orf94Q6P1W5 598 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 RBMS3Q6XE24 437 aaKnown RBP10.95□□□□□ -0.66
RPAIN-202ENST00000381208 PTCHD4Q6ZW05 846 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 HIST2H3AQ71DI3 136 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 PIGWQ7Z7B1 504 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 C1orf87Q8N0U7 546 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 ATG16L2Q8NAA4 619 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 OR8G5Q8NG78 346 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 FANK1Q8TC84 345 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 ITLN1Q8WWA0 313 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 GCDHQ92947 438 aaPredicted RBP10.95□□□□□ -0.66
RPAIN-202ENST00000381208 ERMAPQ96PL5 475 aaPredicted RBP10.95□□□□□ -0.66
RPAIN-202ENST00000381208 OR2V2Q96R30 315 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 GPA33Q99795 319 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 FUZQ9BT04 418 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 HCAR1Q9BXC0 346 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 NDE1Q9NXR1 346 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 KCNG2Q9UJ96 466 aa10.95□□□□□ -0.66
RPAIN-202ENST00000381208 NOP16Q9Y3C1 178 aaKnown RBP10.95□□□□□ -0.66
RPAIN-202ENST00000381208 TMEM89A2RUT3 159 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms