RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 CMTM5Q96DZ9 223 aa14.52□□□□□ -0.08
HMGN1-204ENST00000380749 MRI1Q9BV20 369 aa14.52□□□□□ -0.08
HMGN1-204ENST00000380749 NUAK2Q9H093 628 aa14.52□□□□□ -0.08
HMGN1-204ENST00000380749 SPAG4Q9NPE6 437 aa14.52□□□□□ -0.08
HMGN1-204ENST00000380749 DDX28Q9NUL7 540 aaKnown RBP14.52□□□□□ -0.08
HMGN1-204ENST00000380749 PTTG3PQ9NZH4 202 aa14.52□□□□□ -0.08
HMGN1-204ENST00000380749 OR5V1Q9UGF6 321 aa14.52□□□□□ -0.08
HMGN1-204ENST00000380749 POLR3KQ9Y2Y1 108 aaPredicted RBP14.52□□□□□ -0.08
HMGN1-204ENST00000380749 IER3IP1Q9Y5U9 82 aa14.52□□□□□ -0.08
HMGN1-204ENST00000380749 AUP1Q9Y679 476 aa14.52□□□□□ -0.08
HMGN1-204ENST00000380749 CMYA5Q8N3K9 4069 aa14.52□□□□□ -0.08
HMGN1-204ENST00000380749 A8MXK9 166 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 RER1O15258 196 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 DBHP09172 617 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 CENPAP49450 140 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 ERFP50548 548 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 PSME3P61289 254 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 ZNF154Q13106 437 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 HNRNPA0Q13151 305 aaKnown RBP14.51□□□□□ -0.09
HMGN1-204ENST00000380749 KCNMB1Q16558 191 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 SMARCD3Q6STE5 483 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 FBXW12Q6X9E4 464 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 PTCHD4Q6ZW05 846 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 TSEN54Q7Z6J9 526 aaKnown RBP14.51□□□□□ -0.09
HMGN1-204ENST00000380749 OR5AS1Q8N127 324 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 ATG16L2Q8NAA4 619 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 DEFB108BQ8NET1 73 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 GJC3Q8NFK1 279 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 SIGLEC11Q96RL6 698 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 COQ7Q99807 217 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 ESM1Q9NQ30 184 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 LRCH1Q9Y2L9 728 aa14.51□□□□□ -0.09
HMGN1-204ENST00000380749 TRBV4-1A0A0J9YWV2 114 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 F5H0A9 414 aaPredicted RBP14.5□□□□□ -0.09
HMGN1-204ENST00000380749 TMEM178BH3BS89 294 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 PPP1R3DO95685 299 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 TXNDC12O95881 172 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 ZNF12P17014 697 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 MDH1P40925 334 aaKnown RBP14.5□□□□□ -0.09
HMGN1-204ENST00000380749 SLC6A9P48067 706 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 SRP9P49458 86 aaKnown RBP14.5□□□□□ -0.09
HMGN1-204ENST00000380749 UBA52P62987 128 aaKnown RBP14.5□□□□□ -0.09
HMGN1-204ENST00000380749 HLXQ14774 488 aaPredicted RBP14.5□□□□□ -0.09
HMGN1-204ENST00000380749 GLYATQ6IB77 296 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.5□□□□□ -0.09
HMGN1-204ENST00000380749 JAZF1Q86VZ6 243 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 ZDHHC22Q8N966 263 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 OR10AD1Q8NGE0 317 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 OR13G1Q8NGZ3 307 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 DHRS1Q96LJ7 313 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 ZNF582Q96NG8 517 aaPredicted RBP14.5□□□□□ -0.09
HMGN1-204ENST00000380749 GCM1Q9NP62 436 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 MED4Q9NPJ6 270 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 MMP26Q9NRE1 261 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 DCAF13Q9NV06 445 aaKnown RBP14.5□□□□□ -0.09
HMGN1-204ENST00000380749 ZNF446Q9NWS9 450 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 NUP50Q9UKX7 468 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 PPIAL4AQ9Y536 164 aa14.5□□□□□ -0.09
HMGN1-204ENST00000380749 IMPA2O14732 288 aa14.49□□□□□ -0.09
HMGN1-204ENST00000380749 DIRAS1O95057 198 aa14.49□□□□□ -0.09
HMGN1-204ENST00000380749 RENP00797 406 aa14.49□□□□□ -0.09
HMGN1-204ENST00000380749 RPS2P15880 293 aaKnown RBP14.49□□□□□ -0.09
HMGN1-204ENST00000380749 SMIM11AP58511 58 aa14.49□□□□□ -0.09
HMGN1-204ENST00000380749 FXYD6P3P58550 94 aa14.49□□□□□ -0.09
HMGN1-204ENST00000380749 SEC61A1P61619 476 aaKnown RBP14.49□□□□□ -0.09
HMGN1-204ENST00000380749 SEC23BQ15437 767 aa14.49□□□□□ -0.09
HMGN1-204ENST00000380749 OR2T2Q6IF00 324 aa14.49□□□□□ -0.09
HMGN1-204ENST00000380749 OR8G5Q8NG78 346 aa14.49□□□□□ -0.09
HMGN1-204ENST00000380749 OR52J3Q8NH60 311 aa14.49□□□□□ -0.09
HMGN1-204ENST00000380749 DVL3Q92997 716 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-204ENST00000380749 MEGF10Q96KG7 1140 aa14.49□□□□□ -0.09
HMGN1-204ENST00000380749 C7orf34Q96L11 122 aa14.49□□□□□ -0.09
HMGN1-204ENST00000380749 ERMAPQ96PL5 475 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-204ENST00000380749 GPA33Q99795 319 aa14.49□□□□□ -0.09
HMGN1-204ENST00000380749 ZMAT3Q9HA38 289 aaKnown RBP14.49□□□□□ -0.09
HMGN1-204ENST00000380749 ADA2Q9NZK5 511 aa14.49□□□□□ -0.09
HMGN1-204ENST00000380749 INSIG2Q9Y5U4 225 aa14.49□□□□□ -0.09
HMGN1-204ENST00000380749 LHFPL6Q9Y693 200 aa14.49□□□□□ -0.09
HMGN1-204ENST00000380749 LRRC30A6NM36 301 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 CEACAM18A8MTB9 384 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 TRAPPC2LH3BP13 241 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 SPRY1O43609 319 aaPredicted RBP14.48□□□□□ -0.09
HMGN1-204ENST00000380749 CPT2P23786 658 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 SLC6A6P31641 620 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 CDKN2AP42771 156 aaKnown RBP14.48□□□□□ -0.09
HMGN1-204ENST00000380749 HIST1H3AP68431 136 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 SPIBQ01892 262 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 COX10Q12887 443 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 AWAT1Q58HT5 328 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 HIST2H3PS2Q5TEC6 136 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 LEG1Q6P5S2 330 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 HIST2H3AQ71DI3 136 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 FAM86B1Q8N7N1 296 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 SIGLECL1Q8N7X8 197 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 SGMS2Q8NHU3 365 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 TSSK2Q96PF2 358 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 SSBP3Q9BWW4 388 aaPredicted RBP14.48□□□□□ -0.09
HMGN1-204ENST00000380749 HCAR1Q9BXC0 346 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 V9GYQ6 96 aa14.48□□□□□ -0.09
HMGN1-204ENST00000380749 IGLV1-36A0A0B4J1U3 117 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms