RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 RER1O15258 196 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 EIF4EBP3O60516 100 aaPredicted RBP7.93□□□□□ -1.14
HMGN1-202ENST00000380747 MITFO75030 526 aaPredicted RBP7.93□□□□□ -1.14
HMGN1-202ENST00000380747 ABHD16AO95870 558 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 GYPBP06028 91 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 ERCC1P07992 297 aaPredicted RBP7.93□□□□□ -1.14
HMGN1-202ENST00000380747 ADRA2AP08913 450 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 CLUP10909 449 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 SPI1P17947 270 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 PCSK6P29122 969 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 WNT5AP41221 380 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 ALDH3B1P43353 468 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 DAPP51397 102 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 EFNA4P52798 201 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 SLC25A1P53007 311 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 SELENOVP59797 346 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 PPP2R2BQ00005 443 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 MAD2L1BPQ15013 274 aaPredicted RBP7.93□□□□□ -1.14
HMGN1-202ENST00000380747 CARTPTQ16568 116 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 CCDC92Q53HC0 331 aaPredicted RBP7.93□□□□□ -1.14
HMGN1-202ENST00000380747 SPATA46Q5T0L3 261 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 TMEM236Q5W0B7 351 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 ACSM5Q6NUN0 579 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 FAHD1Q6P587 224 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 TMEM154Q6P9G4 183 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 ARL9Q6T311 187 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 UNQ6126/PRO20091Q6UXV3 157 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 LRP11Q86VZ4 500 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 ZDHHC13Q8IUH4 622 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 ZNF101Q8IZC7 436 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 OR2AJ1Q8NGZ0 328 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 OR1F12Q8NHA8 337 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 ABHD4Q8TB40 342 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 SYNPRQ8TBG9 265 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 ZNRF4Q8WWF5 429 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 DNAJC9Q8WXX5 260 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 PLEKHA8Q96JA3 519 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 EAF1Q96JC9 268 aaPredicted RBP7.93□□□□□ -1.14
HMGN1-202ENST00000380747 C4orf45Q96LM5 186 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 DDOQ99489 341 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 RBM4Q9BWF3 364 aaKnown RBP7.93□□□□□ -1.14
HMGN1-202ENST00000380747 TEX12Q9BXU0 123 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 BCL2L14Q9BZR8 327 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 RAB1BQ9H0U4 201 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 MED20Q9H944 212 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 CMC2Q9NRP2 79 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 KRT84Q9NSB2 600 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 LHFPL6Q9Y693 200 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 CADP27708 2225 aa7.93□□□□□ -1.14
HMGN1-202ENST00000380747 PRR23D1E9PI22 279 aaPredicted RBP7.92□□□□□ -1.14
HMGN1-202ENST00000380747 FAM229AH3BQW9 127 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 M0R233 179 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 LY6HO94772 140 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 CLPTM1O96005 669 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 NGFP01138 241 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 HMGN1P05114 100 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 SPARCP09486 303 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 PRR23D2P0DMB1 279 aaPredicted RBP7.92□□□□□ -1.14
HMGN1-202ENST00000380747 COX5BP10606 129 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 PAICSP22234 425 aaKnown RBP7.92□□□□□ -1.14
HMGN1-202ENST00000380747 GCH1P30793 250 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 FMO3P31513 532 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 GGT2P36268 569 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 EVX1P49640 407 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 PPOXP50336 477 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 CRISP1P54107 249 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 KLF3P57682 345 aaPredicted RBP7.92□□□□□ -1.14
HMGN1-202ENST00000380747 PPP1CBP62140 327 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 CDK5Q00535 292 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 TNK1Q13470 666 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 NKPD1Q17RQ9 610 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 ALKBH6Q3KRA9 238 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 ELFN2Q5R3F8 820 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 SLC18B1Q6NT16 456 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 ZFP1Q6P2D0 407 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 CLEC2AQ6UVW9 174 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 CFAP77Q6ZQR2 320 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 RFPL4BQ6ZWI9 263 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 C10orf67Q8IYJ2 551 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 ZCCHC24Q8N2G6 241 aaKnown RBP7.92□□□□□ -1.14
HMGN1-202ENST00000380747 CIARTQ8N365 385 aaPredicted RBP7.92□□□□□ -1.14
HMGN1-202ENST00000380747 GJC3Q8NFK1 279 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 OR6K6Q8NGW6 343 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 SLC25A40Q8TBP6 338 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 SLC7A6Q92536 515 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 CENPNQ96H22 339 aaPredicted RBP7.92□□□□□ -1.14
HMGN1-202ENST00000380747 SORCS2Q96PQ0 1159 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 PITX2Q99697 317 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 PKP2Q99959 881 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 RHNO1Q9BSD3 238 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 HCAR1Q9BXC0 346 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 NMNAT2Q9BZQ4 307 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 HDHD2Q9H0R4 259 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 GABARAPL1Q9H0R8 117 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 OR51V1Q9H2C8 321 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 TPK1Q9H3S4 243 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 ELOVL3Q9HB03 270 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 SLC25A19Q9HC21 320 aa7.92□□□□□ -1.14
HMGN1-202ENST00000380747 MRPL22Q9NWU5 206 aaKnown RBP7.92□□□□□ -1.14
HMGN1-202ENST00000380747 TVP23BQ9NYZ1 205 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms