RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 KLHL24Q6TFL4 600 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 RHOUQ7L0Q8 258 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 LINC00346Q8IVM7 164 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 WDFY1Q8IWB7 410 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 OR6X1Q8NH79 312 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 FOXRED1Q96CU9 486 aaPredicted RBP19.17■□□□□ 0.66
TRIM54-202ENST00000380075 OR5B2Q96R09 309 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 UTP23Q9BRU9 249 aaKnown RBP19.17■□□□□ 0.66
TRIM54-202ENST00000380075 C1orf198Q9H425 327 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 CYB5R1Q9UHQ9 305 aa19.17■□□□□ 0.66
TRIM54-202ENST00000380075 PTRH2Q9Y3E5 179 aaKnown RBP19.17■□□□□ 0.66
TRIM54-202ENST00000380075 CDRT15L2A8MXV6 281 aa19.16■□□□□ 0.66
TRIM54-202ENST00000380075 RAD1O60671 282 aa19.16■□□□□ 0.66
TRIM54-202ENST00000380075 CSF1P09603 554 aa19.16■□□□□ 0.66
TRIM54-202ENST00000380075 PGA4P0DJD7 388 aa19.16■□□□□ 0.66
TRIM54-202ENST00000380075 PGA3P0DJD8 388 aa19.16■□□□□ 0.66
TRIM54-202ENST00000380075 SULT1A3P0DMM9 295 aa19.16■□□□□ 0.66
TRIM54-202ENST00000380075 SULT1A4P0DMN0 295 aa19.16■□□□□ 0.66
TRIM54-202ENST00000380075 TMIGD3P0DMS9 266 aaPredicted RBP19.16■□□□□ 0.66
TRIM54-202ENST00000380075 COX6A1P12074 109 aa19.16■□□□□ 0.66
TRIM54-202ENST00000380075 ST3GAL2Q16842 350 aa19.16■□□□□ 0.66
TRIM54-202ENST00000380075 CCDC92Q53HC0 331 aaPredicted RBP19.16■□□□□ 0.66
TRIM54-202ENST00000380075 MED30Q96HR3 178 aa19.16■□□□□ 0.66
TRIM54-202ENST00000380075 TAS2R4Q9NYW5 299 aa19.16■□□□□ 0.66
TRIM54-202ENST00000380075 ZNF222Q9UK12 451 aa19.16■□□□□ 0.66
TRIM54-202ENST00000380075 FABP7O15540 132 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 TRAF3IP2O43734 574 aaPredicted RBP19.15■□□□□ 0.66
TRIM54-202ENST00000380075 HTR2CP28335 458 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 SLC35A1P78382 337 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 Q5BKY6 102 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 IGF2-ASQ6U949 168 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 OR2Y1Q8NGV0 311 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 SLC25A28Q96A46 364 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 SLAMF6Q96DU3 332 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 ZPBPQ9BS86 351 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 EMC6Q9BV81 110 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 CENPMQ9NSP4 180 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 A0A0A6YYH2 397 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 CIB4A0PJX0 185 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 A6NJ64 397 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 KLF7O75840 302 aaPredicted RBP19.15■□□□□ 0.66
TRIM54-202ENST00000380075 NR2C1P13056 603 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 MECP2P51608 486 aaKnown RBP19.15■□□□□ 0.66
TRIM54-202ENST00000380075 GTPBP8Q8N3Z3 284 aaPredicted RBP19.15■□□□□ 0.66
TRIM54-202ENST00000380075 LILRB4Q8NHJ6 448 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 DACT3Q96B18 629 aaPredicted RBP19.15■□□□□ 0.66
TRIM54-202ENST00000380075 MOB1AQ9H8S9 216 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 FAM206AQ9NX38 181 aa19.15■□□□□ 0.66
TRIM54-202ENST00000380075 MEIKINA0A087WXM9 373 aa19.14■□□□□ 0.65
TRIM54-202ENST00000380075 TMEM272A0A1B0GTI8 110 aa19.14■□□□□ 0.65
TRIM54-202ENST00000380075 LOC390937A0A1W2PQ73 354 aa19.14■□□□□ 0.65
TRIM54-202ENST00000380075 SULT1C2O00338 296 aa19.14■□□□□ 0.65
TRIM54-202ENST00000380075 CD63P08962 238 aa19.14■□□□□ 0.65
TRIM54-202ENST00000380075 PLA2G7Q13093 441 aa19.14■□□□□ 0.65
TRIM54-202ENST00000380075 INPP5JQ15735 1006 aaPredicted RBP19.14■□□□□ 0.65
TRIM54-202ENST00000380075 TMEM255AQ5JRV8 349 aa19.14■□□□□ 0.65
TRIM54-202ENST00000380075 CREB3L2Q70SY1 520 aa19.14■□□□□ 0.65
TRIM54-202ENST00000380075 PLPP7Q8NBV4 271 aa19.14■□□□□ 0.65
TRIM54-202ENST00000380075 PTX4Q96A99 478 aa19.14■□□□□ 0.65
TRIM54-202ENST00000380075 ANGPTL4Q9BY76 406 aa19.14■□□□□ 0.65
TRIM54-202ENST00000380075 NKIRAS2Q9NYR9 191 aa19.14■□□□□ 0.65
TRIM54-202ENST00000380075 HS3ST3B1Q9Y662 390 aa19.14■□□□□ 0.65
TRIM54-202ENST00000380075 TEX51A0A1B0GUA7 166 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 AQP7P3A6NL99 342 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 SSNA1O43805 119 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 STK17BO94768 372 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 NDUFB6O95139 128 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 IGHEP01854 428 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 ZNF43P17038 809 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 EFNB2P52799 333 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 C1orf100Q5SVJ3 147 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 B3GNT4Q9C0J1 378 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 NOX3Q9HBY0 568 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 A0A1W2PNR3 127 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 PMS2P2O95744 297 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 IL5P05113 134 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 GABRA1P14867 456 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 PRSS3P35030 304 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 C19orf57Q0VDD7 668 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 SLC25A47Q6Q0C1 308 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 ELMOD2Q8IZ81 293 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 NTNG2Q96CW9 530 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 SPRY4Q9C004 299 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 TMEM185BQ9H7F4 350 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 NPTNQ9Y639 398 aa19.13■□□□□ 0.65
TRIM54-202ENST00000380075 TLX3O43711 291 aaPredicted RBP19.12■□□□□ 0.65
TRIM54-202ENST00000380075 ZNF780AO75290 641 aaPredicted RBP19.12■□□□□ 0.65
TRIM54-202ENST00000380075 ALDOBP05062 364 aa19.12■□□□□ 0.65
TRIM54-202ENST00000380075 PTHLHP12272 177 aa19.12■□□□□ 0.65
TRIM54-202ENST00000380075 SSR4P51571 173 aa19.12■□□□□ 0.65
TRIM54-202ENST00000380075 KCNMB1Q16558 191 aa19.12■□□□□ 0.65
TRIM54-202ENST00000380075 PCGF3Q3KNV8 242 aa19.12■□□□□ 0.65
TRIM54-202ENST00000380075 TMEM176BQ3YBM2 270 aaPredicted RBP19.12■□□□□ 0.65
TRIM54-202ENST00000380075 GLYATL3Q5SZD4 288 aa19.12■□□□□ 0.65
TRIM54-202ENST00000380075 PRAMEF20Q5VT98 475 aa19.12■□□□□ 0.65
TRIM54-202ENST00000380075 LAMTOR1Q6IAA8 161 aa19.12■□□□□ 0.65
TRIM54-202ENST00000380075 CORO6Q6QEF8 472 aa19.12■□□□□ 0.65
TRIM54-202ENST00000380075 TMPPEQ6ZT21 453 aa19.12■□□□□ 0.65
TRIM54-202ENST00000380075 ADGRE4PQ86SQ3 457 aa19.12■□□□□ 0.65
TRIM54-202ENST00000380075 OR2AJ1Q8NGZ0 328 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms