RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 HIST2H3PS2Q5TEC6 136 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 OR5M10Q6IEU7 315 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 HIST2H3AQ71DI3 136 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 HIST3H2AQ7L7L0 130 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 DCXRQ7Z4W1 244 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 KDM8Q8N371 416 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 OR5M1Q8NGP8 315 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 HIST1H2ACQ93077 130 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 ADAT3Q96EY9 351 aaPredicted RBP8.52□□□□□ -1.05
TRIM39-202ENST00000376659 SERINC1Q9NRX5 453 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 ZNF319Q9P2F9 582 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 TEKT2Q9UIF3 430 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 IKZF2Q9UKS7 526 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 ATXN7L1Q9ULK2 861 aaPredicted RBP8.52□□□□□ -1.05
TRIM39-202ENST00000376659 A0A0A6YYH2 397 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 A6NIZ1 184 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 A6NJ64 397 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 HMSDA8MTL9 139 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 MCRIP1C9JLW8 97 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 RAB27BO00194 218 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 OR2T1O43869 369 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 RAMP1O60894 148 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 ALOX12BO75342 701 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 CD8AP01732 235 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 SPARCP09486 303 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 SSTR2P30874 369 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 RAP1BP61224 184 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 RAP1AP62834 184 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 GLO1Q04760 184 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 INPP5JQ15735 1006 aaPredicted RBP8.52□□□□□ -1.05
TRIM39-202ENST00000376659 PCGF3Q3KNV8 242 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 FAM198BQ6UWH4 519 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 ADGRE4PQ86SQ3 457 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 OR5AS1Q8N127 324 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 OR1J2Q8NGS2 313 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 SLC25A36Q96CQ1 311 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 APMAPQ9HDC9 416 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 MED9Q9NWA0 146 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 MED29Q9NX70 200 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 MED11Q9P086 117 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 GDF2Q9UK05 429 aaPredicted RBP8.52□□□□□ -1.05
TRIM39-202ENST00000376659 FBXL2Q9UKC9 423 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 OR52A1Q9UKL2 312 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 EMC9Q9Y3B6 208 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 WIF1Q9Y5W5 379 aa8.52□□□□□ -1.05
TRIM39-202ENST00000376659 TUBAL3A6NHL2 446 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 IL2RAP01589 272 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 LPLP06858 475 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 UMODP07911 640 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 RRASP10301 218 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 DNASE1P24855 282 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 HOXA6P31267 233 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 MFAP5Q13361 173 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 KRTAP27-1Q3LI81 207 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 POMZP3Q6PJE2 187 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 RHOUQ7L0Q8 258 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 GABRG1Q8N1C3 465 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 NOXO1Q8NFA2 376 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 OR6M1Q8NGM8 313 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 AKIRIN1Q9H9L7 192 aaPredicted RBP8.51□□□□□ -1.05
TRIM39-202ENST00000376659 RALGAPA1Q6GYQ0 2036 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 TMEM14DPA8MWL7 114 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 LINC01387J3KSC0 135 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 RAD1O60671 282 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 S100A6P06703 90 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 HTR2CP28335 458 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 MPGP29372 298 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 DAP3P51398 398 aaKnown RBP8.51□□□□□ -1.05
TRIM39-202ENST00000376659 RIDAP52758 137 aaKnown RBP8.51□□□□□ -1.05
TRIM39-202ENST00000376659 RSPO1Q2MKA7 263 aaPredicted RBP8.51□□□□□ -1.05
TRIM39-202ENST00000376659 NKAIN1Q4KMZ8 207 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 ZNF704Q6ZNC4 412 aaPredicted RBP8.51□□□□□ -1.05
TRIM39-202ENST00000376659 OR10G3Q8NGC4 313 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 C11orf40Q8WZ69 217 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 PIGKQ92643 395 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 NABP1Q96AH0 204 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 MRGPRX4Q96LA9 322 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 CELSR3Q9NYQ7 3312 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 PI4KAP42356 2102 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 C5orf63A6NC05 138 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 H3BSH0 61 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 XKRYO14609 159 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 GDF9O60383 454 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 RGS11O94810 467 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 CCL7P80098 99 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 PMPCAQ10713 525 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 MYBPHQ13203 477 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 UBXN2BQ14CS0 331 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 GRK1Q15835 563 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 FAM209BQ5JX69 171 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 LINC00346Q8IVM7 164 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 LINC00518Q8N0U6 118 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 OR51S1Q8NGJ8 323 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 OR2T35Q8NGX2 323 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 MARC2Q969Z3 335 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 PHF21AQ96BD5 680 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 SOX7Q9BT81 388 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 SLITRK2Q9H156 845 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 CNTD2Q9H8S5 307 aa8.51□□□□□ -1.05
TRIM39-202ENST00000376659 MYOTQ9UBF9 498 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms