RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 G6PCP35575 357 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 DCXRQ7Z4W1 244 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 ERGIC1Q969X5 290 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 RNF39Q9H2S5 420 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 STARD5Q9NSY2 213 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 GDF2Q9UK05 429 aaPredicted RBP10.67□□□□□ -0.7
VPS13A-205ENST00000376636 M0R2Z0 102 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 APEHP13798 732 aaKnown RBP10.67□□□□□ -0.7
VPS13A-205ENST00000376636 FPR3P25089 353 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 ZNF547Q8IVP9 402 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 SERINC4A6NH21 518 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 K7ERU9 68 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 TMEM127O75204 238 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 AQP8O94778 261 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 LIMS3P0CW19 117 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 LIMS4P0CW20 117 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 PRLHRP49683 370 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 HOXC5Q00444 222 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 TBPL2Q6SJ96 375 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 TMEM230Q96A57 120 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 ZNF2Q9BSG1 426 aaPredicted RBP10.67□□□□□ -0.7
VPS13A-205ENST00000376636 A4GALTQ9NPC4 353 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 MMP26Q9NRE1 261 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 A0A1B0GUH1 482 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 SHC1P29353 583 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 ARSDP51689 593 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 EXOSC2Q13868 293 aaKnown RBP10.67□□□□□ -0.7
VPS13A-205ENST00000376636 C17orf78Q8N4C9 275 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 OR51F2Q8NH61 342 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 OR1L3Q8NH93 324 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 PRSS3P2Q8NHM4 247 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 POM121L2Q96KW2 1035 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 MS4A10Q96PG2 267 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 CALHM2Q9HA72 323 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 GJB5O95377 273 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 Q3ZCU0 254 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 SPRED1Q7Z699 444 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 SLC26A10Q8NG04 563 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 OR52E1Q8NGJ3 308 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 SIRT3Q9NTG7 399 aaPredicted RBP10.67□□□□□ -0.7
VPS13A-205ENST00000376636 RAB38P57729 211 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 DCDP81605 110 aaKnown RBP10.67□□□□□ -0.7
VPS13A-205ENST00000376636 FOXK2Q01167 660 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 SMAGPQ0VAQ4 97 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 MLF2Q15773 248 aaPredicted RBP10.67□□□□□ -0.7
VPS13A-205ENST00000376636 FER1L6-AS2Q96M78 137 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 SEC11CQ9BY50 192 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 PIAS2O75928 621 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 CCL5P13501 91 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 PJVKQ0ZLH3 352 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 TP53RKQ96S44 253 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 TIMM29Q9BSF4 260 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 COL3A1P02461 1466 aaPredicted RBP10.67□□□□□ -0.7
VPS13A-205ENST00000376636 SYT5O00445 386 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 SDHBP21912 280 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 RXFP4Q8TDU9 374 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 PIAS3Q9Y6X2 628 aa10.67□□□□□ -0.7
VPS13A-205ENST00000376636 FZD6O60353 706 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 TCTAP57738 103 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 EXT1Q16394 746 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 LEXMQ3ZCV2 418 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 SLC25A43Q8WUT9 341 aaPredicted RBP10.66□□□□□ -0.7
VPS13A-205ENST00000376636 SLC22A20A6NK97 555 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 LRP11Q86VZ4 500 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 NEURL3Q96EH8 262 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 LRFN3Q9BTN0 628 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 ZNF716A6NP11 495 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 SLC5A2P31639 672 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 ARR3P36575 388 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 IHHQ14623 411 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 J3KTA2 159 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 AIFM1O95831 613 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 ABCD3P28288 659 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 NOVA1P51513 510 aaKnown RBP10.66□□□□□ -0.7
VPS13A-205ENST00000376636 FAM71CQ8NEG0 241 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 RHBDD1Q8TEB9 315 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 ZFPM2Q8WW38 1151 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 PIKFYVEQ9Y2I7 2098 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 TMEM238LA0A1B0GVL6 79 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 CLEC18AA5D8T8 446 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 A6NJY4 79 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 PTHLHP12272 177 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 HTR1DP28221 377 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 GP2P55259 537 aaKnown RBP10.66□□□□□ -0.7
VPS13A-205ENST00000376636 SMIM21Q3B7S5 101 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 ANKRD16Q6P6B7 361 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 APCDD1Q8J025 514 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 CLEC18CQ8NCF0 446 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 COPS9Q8WXC6 57 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 OPALINQ96PE5 141 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 TAAR9Q96RI9 348 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.66□□□□□ -0.7
VPS13A-205ENST00000376636 UBE2L5PA0A1B0GUS4 154 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 WDR1O75083 606 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 APOOQ9BUR5 198 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 BCL2L11O43521 198 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 WDR74Q6RFH5 385 aaPredicted RBP10.66□□□□□ -0.7
VPS13A-205ENST00000376636 GDE1Q9NZC3 331 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 OR5V1Q9UGF6 321 aa10.66□□□□□ -0.7
VPS13A-205ENST00000376636 RALGAPA1Q6GYQ0 2036 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms