RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ELAVL1Q15717 326 aaKnown RBP11.61□□□□□ -0.55
MSH5-204ENST00000375755 IL34Q6ZMJ4 242 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 TMEM200AQ86VY9 491 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 ARHGEF39Q8N4T4 335 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 ZNF676Q8N7Q3 588 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 ANKRD9Q96BM1 317 aaPredicted RBP11.61□□□□□ -0.55
MSH5-204ENST00000375755 LAT2Q9GZY6 243 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 CST11Q9H112 138 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 RHOFQ9HBH0 211 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 FSCN3Q9NQT6 498 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 PRMT8Q9NR22 394 aaPredicted RBP11.61□□□□□ -0.55
MSH5-204ENST00000375755 SMCO4Q9NRQ5 59 aa11.61□□□□□ -0.55
MSH5-204ENST00000375755 LOC100509620A0A075B734 347 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 HLA-GP17693 338 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 EMDP50402 254 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 NKPD1Q17RQ9 610 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 ZNF627Q7L945 461 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 LYG2Q86SG7 212 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 SLC43A2Q8N370 569 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 OR4K17Q8NGC6 315 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 NUBPLQ8TB37 319 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 ZMAT3Q9HA38 289 aaKnown RBP11.6□□□□□ -0.55
MSH5-204ENST00000375755 PCDHGA1Q9Y5H4 931 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 CELSR3Q9NYQ7 3312 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 TEX13DA0A0J9YY54 714 aaPredicted RBP11.6□□□□□ -0.55
MSH5-204ENST00000375755 LOC100289279A0A1B0GTE1 492 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 URADA6NGE7 173 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 PDGFBP01127 241 aaPredicted RBP11.6□□□□□ -0.55
MSH5-204ENST00000375755 SFTA3P0C7M3 94 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 PRF1P14222 555 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 ACAA2P42765 397 aaKnown RBP11.6□□□□□ -0.55
MSH5-204ENST00000375755 BTG2P78543 158 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 ELOCQ15369 112 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 RAB11BQ15907 218 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 C9orf152Q5JTZ5 239 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 LEG1Q6P5S2 330 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 OR2G2Q8NGZ5 317 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 RRNAD1Q96FB5 475 aaKnown RBP11.6□□□□□ -0.55
MSH5-204ENST00000375755 IKZF2Q9UKS7 526 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 CSAG2Q9Y5P2 127 aa11.6□□□□□ -0.55
MSH5-204ENST00000375755 FOXS1O43638 330 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 CLN5O75503 358 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 CD14P08571 375 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 TLX1P31314 330 aaPredicted RBP11.59□□□□□ -0.55
MSH5-204ENST00000375755 RBM34P42696 430 aaKnown RBP11.59□□□□□ -0.55
MSH5-204ENST00000375755 CDKN2AP42771 156 aaKnown RBP11.59□□□□□ -0.55
MSH5-204ENST00000375755 MGAT2Q10469 447 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 FHL5Q5TD97 284 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 DPY19L2P2Q6ZN68 376 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 JAZF1Q86VZ6 243 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 C15orf54Q8N8G6 183 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 DCUN1D4Q92564 292 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 FOXRED1Q96CU9 486 aaPredicted RBP11.59□□□□□ -0.55
MSH5-204ENST00000375755 C19orf53Q9UNZ5 99 aaPredicted RBP11.59□□□□□ -0.55
MSH5-204ENST00000375755 CACNA1CQ13936 2221 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 PI4KAP42356 2102 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 FAM221BA6H8Z2 402 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 ZNF736B4DX44 427 aaPredicted RBP11.59□□□□□ -0.55
MSH5-204ENST00000375755 C9JQL5 133 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 RPS27P42677 84 aaKnown RBP11.59□□□□□ -0.55
MSH5-204ENST00000375755 CAPZBP47756 277 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 OR1D5P58170 312 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 TGIF1Q15583 401 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 TMPPEQ6ZT21 453 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 KCTD9Q7L273 389 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 SLC16A9Q7RTY1 509 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 SLC25A42Q86VD7 318 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 PRSS35Q8N3Z0 413 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 DEFB123Q8N688 67 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 OR4S1Q8NGB4 309 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 GPR148Q8TDV2 347 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 CASTOR1Q8WTX7 329 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 MCHR2Q969V1 340 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 SEC61A2Q9H9S3 476 aa11.59□□□□□ -0.55
MSH5-204ENST00000375755 METTL1Q9UBP6 276 aaKnown RBP11.59□□□□□ -0.55
MSH5-204ENST00000375755 C9orf170A2RU37 121 aa11.58□□□□□ -0.55
MSH5-204ENST00000375755 AK1P00568 194 aa11.58□□□□□ -0.55
MSH5-204ENST00000375755 FBP1P09467 338 aa11.58□□□□□ -0.55
MSH5-204ENST00000375755 SELLP14151 372 aa11.58□□□□□ -0.55
MSH5-204ENST00000375755 AGAP20933 346 aa11.58□□□□□ -0.55
MSH5-204ENST00000375755 HGFACQ04756 655 aa11.58□□□□□ -0.55
MSH5-204ENST00000375755 PRICKLE4Q2TBC4 344 aa11.58□□□□□ -0.55
MSH5-204ENST00000375755 CD163Q86VB7 1156 aa11.58□□□□□ -0.55
MSH5-204ENST00000375755 OR4N2Q8NGD1 307 aa11.58□□□□□ -0.55
MSH5-204ENST00000375755 MITD1Q8WV92 249 aa11.58□□□□□ -0.55
MSH5-204ENST00000375755 MRGPRFQ96AM1 343 aa11.58□□□□□ -0.55
MSH5-204ENST00000375755 RBM18Q96H35 190 aaKnown RBP11.58□□□□□ -0.55
MSH5-204ENST00000375755 WNT16Q9UBV4 365 aa11.58□□□□□ -0.55
MSH5-204ENST00000375755 LPAR3Q9UBY5 353 aa11.58□□□□□ -0.55
MSH5-204ENST00000375755 MRPS17Q9Y2R5 130 aaKnown RBP11.58□□□□□ -0.55
MSH5-204ENST00000375755 TMED7Q9Y3B3 224 aa11.58□□□□□ -0.55
MSH5-204ENST00000375755 NUP210LQ5VU65 1888 aa11.58□□□□□ -0.56
MSH5-204ENST00000375755 TVP23AA6NH52 213 aa11.58□□□□□ -0.56
MSH5-204ENST00000375755 RNASEK-C17orf49H0YIS7 233 aa11.58□□□□□ -0.56
MSH5-204ENST00000375755 K7ESF4 209 aa11.58□□□□□ -0.56
MSH5-204ENST00000375755 SLC17A2O00624 439 aa11.58□□□□□ -0.56
MSH5-204ENST00000375755 GPR75O95800 540 aa11.58□□□□□ -0.56
MSH5-204ENST00000375755 CYB5AP00167 134 aa11.58□□□□□ -0.56
MSH5-204ENST00000375755 CRHP06850 196 aa11.58□□□□□ -0.56
MSH5-204ENST00000375755 RCC1P18754 421 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms