RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 PTGDSP41222 190 aa12.5□□□□□ -0.41
MSH5-202ENST00000375740 RAP2BP61225 183 aa12.5□□□□□ -0.41
MSH5-202ENST00000375740 EIF2B1Q14232 305 aaKnown RBP12.5□□□□□ -0.41
MSH5-202ENST00000375740 HSPB2Q16082 182 aa12.5□□□□□ -0.41
MSH5-202ENST00000375740 HFEQ30201 348 aa12.5□□□□□ -0.41
MSH5-202ENST00000375740 DCAF12L2Q5VW00 463 aa12.5□□□□□ -0.41
MSH5-202ENST00000375740 FDX2Q6P4F2 183 aa12.5□□□□□ -0.41
MSH5-202ENST00000375740 MDGA2Q7Z553 956 aa12.5□□□□□ -0.41
MSH5-202ENST00000375740 DDIT4LQ96D03 193 aa12.5□□□□□ -0.41
MSH5-202ENST00000375740 NARS2Q96I59 477 aaKnown RBP12.5□□□□□ -0.41
MSH5-202ENST00000375740 C7orf50Q9BRJ6 194 aaKnown RBP12.5□□□□□ -0.41
MSH5-202ENST00000375740 TMPRSS13Q9BYE2 586 aa12.5□□□□□ -0.41
MSH5-202ENST00000375740 SLC26A1Q9H2B4 701 aa12.5□□□□□ -0.41
MSH5-202ENST00000375740 SLC22A13Q9Y226 551 aa12.5□□□□□ -0.41
MSH5-202ENST00000375740 CACNA1CQ13936 2221 aa12.5□□□□□ -0.41
MSH5-202ENST00000375740 H3BML4 177 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 ZNF28P17035 718 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 ACHEP22303 614 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 CRABP1P29762 137 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 MEOX2P50222 304 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 INPP5JQ15735 1006 aaPredicted RBP12.49□□□□□ -0.41
MSH5-202ENST00000375740 KRT77Q7Z794 578 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 DND1Q8IYX4 353 aaKnown RBP12.49□□□□□ -0.41
MSH5-202ENST00000375740 SYNPRQ8TBG9 265 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 RNF128Q8TEB7 428 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 C2CD4CQ8TF44 421 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 ASB10Q8WXI3 467 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 GINS4Q9BRT9 223 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 ABHD6Q9BV23 337 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 METTL7AQ9H8H3 244 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 C19orf25Q9UFG5 118 aaPredicted RBP12.49□□□□□ -0.41
MSH5-202ENST00000375740 OPN4Q9UHM6 478 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 GTF2A1LQ9UNN4 478 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 NPIPA5E9PKD4 350 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 ZNF208O43345 1280 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 RAD1O60671 282 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 TMEM127O75204 238 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 WNT11O96014 354 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 CALCBP10092 127 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 FGF5P12034 268 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 DCTDP32321 178 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 AKR1C2P52895 323 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 DLX5P56178 289 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 ROM1Q03395 351 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 TLE3Q04726 772 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 GLO1Q04760 184 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 AKR1C1Q04828 323 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 FMODQ06828 376 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 OR10K1Q8NGX5 313 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 DEFB126Q9BYW3 111 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 PRMT8Q9NR22 394 aaPredicted RBP12.49□□□□□ -0.41
MSH5-202ENST00000375740 NPIPA1Q9UND3 350 aa12.49□□□□□ -0.41
MSH5-202ENST00000375740 TRAV20A0A0B4J274 112 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 A6NIZ1 184 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 LAMTOR5O43504 91 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 PRAF2O60831 178 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 VSIG10L2P0DP72 767 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 ZNF35P13682 527 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 ZNF41P51814 821 aaPredicted RBP12.48□□□□□ -0.41
MSH5-202ENST00000375740 RAP1BP61224 184 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 RAP1AP62834 184 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 TEX30Q5JUR7 227 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 ZNF626Q68DY1 528 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 KCTD18Q6PI47 426 aaPredicted RBP12.48□□□□□ -0.41
MSH5-202ENST00000375740 TMPRSS12Q86WS5 348 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 CBLN2Q8IUK8 224 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 PXT1Q8NFP0 134 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 MCHR2Q969V1 340 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 S100A16Q96FQ6 103 aaKnown RBP12.48□□□□□ -0.41
MSH5-202ENST00000375740 CHST11Q9NPF2 352 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 MED29Q9NX70 200 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 H0YC42 278 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 YKT6O15498 198 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 CREBL2O60519 120 aaPredicted RBP12.48□□□□□ -0.41
MSH5-202ENST00000375740 OPN1LWP04000 364 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 ANXA2P07355 339 aaKnown RBP12.48□□□□□ -0.41
MSH5-202ENST00000375740 CPN1P15169 458 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 MSX1P28360 303 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 KCNJ3P48549 501 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 RPS15P62841 145 aaKnown RBP12.48□□□□□ -0.41
MSH5-202ENST00000375740 HSF1Q00613 529 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 POU3F1Q03052 451 aaPredicted RBP12.48□□□□□ -0.41
MSH5-202ENST00000375740 NAXDQ8IW45 347 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 OR5T2Q8NGG2 359 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 POC1BQ8TC44 478 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 TSEN15Q8WW01 171 aaKnown RBP12.48□□□□□ -0.41
MSH5-202ENST00000375740 C5orf34Q96MH7 638 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 CMSS1Q9BQ75 279 aaKnown RBP12.48□□□□□ -0.41
MSH5-202ENST00000375740 MRI1Q9BV20 369 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 POTEKPQ9BYX7 375 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 DNTTIP1Q9H147 329 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 SDHAF3Q9NRP4 125 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 TAS2R3Q9NYW6 316 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 EMC3Q9P0I2 261 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 FOXJ3Q9UPW0 622 aa12.48□□□□□ -0.41
MSH5-202ENST00000375740 FREM3P0C091 2139 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 LIPT2A6NK58 231 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 FBXO45P0C2W1 286 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 H2AFB1P0C5Y9 115 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 RAB13P51153 203 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms