RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 S100A7AQ86SG5 101 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 OR10G3Q8NGC4 313 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 KIRREL1Q96J84 757 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 CRISPLD2Q9H0B8 497 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 RAB22AQ9UL26 194 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 FLVCR2Q9UPI3 526 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 CSAG2Q9Y5P2 127 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 TAF1P21675 1872 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 TMEM235A6NFC5 223 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 SOD1P00441 154 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 NTF3P20783 257 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 RPS19P39019 145 aaKnown RBP13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 GRB2P62993 217 aaKnown RBP13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 CLVS2Q5SYC1 327 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 LRRC56Q8IYG6 542 aaPredicted RBP13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 CISD2Q8N5K1 135 aaKnown RBP13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 RHOXF1Q8NHV9 184 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 OR52A5Q9H2C5 316 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 M0QZ24 198 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 SLC16A6O15403 523 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 GPR12P47775 334 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 HES3Q5TGS1 186 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 L3MBTL4Q8NA19 623 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 MAGT1Q9H0U3 335 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 MED9Q9NWA0 146 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 CROCCQ5TZA2 2017 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 TMPRSS11DO60235 418 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 LIPNQ5VXI9 398 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 CREB3L2Q70SY1 520 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 KCNRGQ8N5I3 272 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 TCAPO15273 167 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 MRPS14O60783 128 aaKnown RBP13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 SRFP11831 508 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 ACSM5Q6NUN0 579 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 TMEM81Q6P7N7 255 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 GRINAQ7Z429 371 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 C15orf54Q8N8G6 183 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 FGF14Q92915 247 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 TMEM208Q9BTX3 173 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 EXOSC3Q9NQT5 275 aaKnown RBP13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 SLC22A13Q9Y226 551 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 MMACHCQ9Y4U1 282 aa13.4□□□□□ -0.26
NOTCH4-201ENST00000375023 ELK1P19419 428 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 LAP3P28838 519 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 RAC1P63000 192 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 ELSPBP1Q96BH3 223 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 GPANK1O95872 356 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 CST5P28325 142 aaPredicted RBP13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 MTNR1BP49286 362 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 UBE2G1P62253 170 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 FUNDC1Q8IVP5 155 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 OR52I2Q8NH67 350 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 MRGPRX1Q96LB2 322 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 SDF2Q99470 211 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 ZDHHC5Q9C0B5 715 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 GPR84Q9NQS5 396 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 TRABD2BA6NFA1 517 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 FCMRO60667 390 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 OR2F2O95006 317 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 ACKR3P25106 362 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 AKR7LQ8NHP1 331 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 DPH3P1Q9H4G8 78 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 TEX51A0A1B0GUA7 166 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 GPRIN2O60269 458 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 IGHV3-13P01766 116 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 IGHV3-7P01780 117 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 GNG10P50151 68 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 ZNF83P51522 516 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 Q6ZRG5 221 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 OR10AD1Q8NGE0 317 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 YIPF5Q969M3 257 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 TEAD3Q99594 435 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 DAPP1Q9UN19 280 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 DIMT1Q9UNQ2 313 aaKnown RBP13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 CDX4O14627 284 aaPredicted RBP13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 HMGA1P17096 107 aaKnown RBP13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 SOHLH1Q5JUK2 328 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 FAM58AQ8N1B3 248 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 TMEM102Q8N9M5 508 aaPredicted RBP13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 ARPC3O15145 178 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 ABLIM3O94929 683 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 CNR1P21554 472 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 METAP1P53582 386 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 TOR2AQ5JU69 321 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 OR10V1Q8NGI7 309 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 CMBLQ96DG6 245 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 HS3ST3A1Q9Y663 406 aa13.39□□□□□ -0.27
NOTCH4-201ENST00000375023 F6UZH7 168 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 CRXO43186 299 aaPredicted RBP13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 HAAOP46952 286 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 TIGD3Q6B0B8 471 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 ZNRF4Q8WWF5 429 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 PLEKHF2Q9H8W4 249 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 SHROOM3Q8TF72 1996 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 ZNF724A8MTY0 619 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 OLFM2O95897 454 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 C4orf17Q53FE4 359 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 LAIR1Q6GTX8 287 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 FAM122CQ6P4D5 195 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms