RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 CFPP27918 469 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 RPS23P62266 143 aaKnown RBP18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 ZIC1Q15915 447 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 DCST2Q5T1A1 773 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 ASPHD2Q6ICH7 369 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 LEG1Q6P5S2 330 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 OR4N5Q8IXE1 308 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 CD300LFQ8TDQ1 290 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 CLDN4O14493 209 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 LDB3O75112 727 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 SLC26A5P58743 744 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 DMWDQ09019 674 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 RHEBQ15382 184 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 USF2Q15853 346 aaPredicted RBP18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 GUK1Q16774 197 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 PLPP4Q5VZY2 271 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 SLC16A9Q7RTY1 509 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 SEMA6DQ8NFY4 1073 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 SCRT1Q9BWW7 348 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 ADAP2Q9NPF8 381 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 HDGFL3Q9Y3E1 203 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 MMP24Q9Y5R2 645 aa18.5■□□□□ 0.55
TMEFF1-201ENST00000374879 LRRK1Q38SD2 2015 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 ZNF726A6NNF4 738 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 ZNF432O94892 652 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 GPANK1O95872 356 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 CSTBP04080 98 aaKnown RBP18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 SNCAP37840 140 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 ZNF84P51523 738 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 ARHGAP19Q14CB8 494 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 ALG10BQ5I7T1 473 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 FAHD2BQ6P2I3 314 aaPredicted RBP18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 LYPD6BQ8NI32 183 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 FAHD2AQ96GK7 314 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 EIF5A2Q9GZV4 153 aaKnown RBP18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 PDE7BQ9NP56 450 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 TP53TG5Q9Y2B4 290 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 TSPAN15O95858 294 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 SOD3P08294 240 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 LYL1P12980 280 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 CCL5P13501 91 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 CDKN2AP42771 156 aaKnown RBP18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 MNX1P50219 401 aaPredicted RBP18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 NUBP1P53384 320 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 RAP1AP62834 184 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 LBHQ53QV2 105 aaPredicted RBP18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 TCEAL5Q5H9L2 206 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 ZNF761Q86XN6 746 aaPredicted RBP18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 ZNF615Q8N8J6 731 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 ACBD4Q8NC06 268 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 LINC00615Q96LM1 132 aaPredicted RBP18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 PCBD2Q9H0N5 130 aa18.49■□□□□ 0.55
TMEFF1-201ENST00000374879 TMEM212A6NML5 194 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 SEC14L6B5MCN3 397 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 LINC00271P0C7V0 271 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 SLC2A1P11166 492 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 RAB4BP61018 213 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 MESP2Q0VG99 397 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 TOMM20Q15388 145 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 TRMT12Q53H54 448 aaKnown RBP18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 KHDC3LQ587J8 217 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 GLYATL3Q5SZD4 288 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 DPY19L2P2Q6ZN68 376 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 TAF8Q7Z7C8 310 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 RNF128Q8TEB7 428 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 MRPL37Q9BZE1 423 aaKnown RBP18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 MYO7AQ13402 2215 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 SCN2AQ99250 2005 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 PRNPP04156 253 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 MAP3K8P41279 467 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 KIR3DL2P43630 455 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 MIDNQ504T8 468 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 ARRDC3Q96B67 414 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 ASB16Q96NS5 453 aa18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 CGGBP1Q9UFW8 167 aaPredicted RBP18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 ZNF107Q9UII5 783 aaPredicted RBP18.48■□□□□ 0.55
TMEFF1-201ENST00000374879 SNRPCP09234 159 aaKnown RBP18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 CISD3P0C7P0 127 aa18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 CTNNB1P35222 781 aa18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 EIF5AP63241 154 aaKnown RBP18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 RAB32Q13637 225 aa18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 FJX1Q86VR8 437 aa18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 OR2L5Q8NG80 312 aa18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 MARCH1Q8TCQ1 289 aa18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 ZNF514Q96K75 400 aaPredicted RBP18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 S100A13Q99584 98 aa18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 MRPS18BQ9Y676 258 aaKnown RBP18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 ADRB3P13945 408 aa18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 HTR2CP28335 458 aa18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 HRH1P35367 487 aa18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 TSFMP43897 325 aaKnown RBP18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 OR8G1Q15617 311 aa18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 TMEM268Q5VZI3 342 aa18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 LRRC25Q8N386 305 aaPredicted RBP18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 NKD1Q969G9 470 aa18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 TM7SF3Q9NS93 570 aa18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 FLVCR1Q9Y5Y0 555 aa18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 NOTCH4Q99466 2003 aa18.47■□□□□ 0.55
TMEFF1-201ENST00000374879 NME2P1O60361 137 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms