RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 SRPX2O60687 465 aaPredicted RBP8.59□□□□□ -1.03
SF3A3-201ENST00000373019 CA11O75493 328 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 CX3CR1P49238 355 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 PPM1FP49593 454 aaPredicted RBP8.59□□□□□ -1.03
SF3A3-201ENST00000373019 FHITP49789 147 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 SOX8P57073 446 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 CLDN2P57739 230 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 DEFB103AP81534 67 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 FHL1Q13642 323 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 GGTLC2Q14390 218 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 NPAS4Q8IUM7 802 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 OR51A7Q8NH64 312 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 OR4C6Q8NH72 309 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 SFXN5Q8TD22 340 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 MENTQ9BUN1 341 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 PDE7BQ9NP56 450 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 HCSTQ9UBK5 93 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 SPTBP11277 2137 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 TRBV5-5A0A0J9YX44 114 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 TP53I11O14683 189 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 NME2P1O60361 137 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 LYPD3O95274 346 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 AMBPP02760 352 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 IGFALSP35858 605 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 MOGAT2Q3SYC2 334 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 ARSJQ5FYB0 599 aaPredicted RBP8.59□□□□□ -1.03
SF3A3-201ENST00000373019 EIF5AL1Q6IS14 154 aaKnown RBP8.59□□□□□ -1.03
SF3A3-201ENST00000373019 NXPE4Q6UWF7 544 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 MED25Q71SY5 747 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 PEG10Q86TG7 708 aaKnown RBP8.59□□□□□ -1.03
SF3A3-201ENST00000373019 ZNF227Q86WZ6 799 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 TMEM104Q8NE00 496 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 OR51A4Q8NGJ6 313 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 OR13D1Q8NGV5 346 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 OR10AC1Q8NH08 325 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 RSC1A1Q92681 617 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 PTCHD1Q96NR3 888 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 LYSMD1Q96S90 227 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 CCNL2Q96S94 520 aaPredicted RBP8.59□□□□□ -1.03
SF3A3-201ENST00000373019 OR51B6Q9H340 312 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 ZMAT3Q9HA38 289 aaKnown RBP8.59□□□□□ -1.03
SF3A3-201ENST00000373019 FRRS1LQ9P0K9 344 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 SLC13A4Q9UKG4 626 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 HEATR5AQ86XA9 2040 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 A0A087WV62 115 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 EIF1AYO14602 144 aaKnown RBP8.59□□□□□ -1.03
SF3A3-201ENST00000373019 LEFTY1O75610 366 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 RCBTB2O95199 551 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 RABIFP47224 123 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 EIF1AXP47813 144 aaKnown RBP8.59□□□□□ -1.03
SF3A3-201ENST00000373019 DUSP2Q05923 314 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 SPEM2Q0P670 501 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 C16orf54Q6UWD8 224 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 TMEM150AQ86TG1 271 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 CCDC74AQ96AQ1 378 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 DIRC2Q96SL1 478 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 KCNJ16Q9NPI9 418 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 SPTBN2O15020 2390 aa8.59□□□□□ -1.03
SF3A3-201ENST00000373019 A0A1B0GTH9 108 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 SYT7O43581 403 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 ZNF354AO60765 605 aaPredicted RBP8.58□□□□□ -1.04
SF3A3-201ENST00000373019 CXCL10P02778 98 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 ELFN1P0C7U0 828 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 AKR1C4P17516 323 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 CFPP27918 469 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 SKP1P63208 163 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 TGM3Q08188 693 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 FBXW9Q5XUX1 488 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 ZNF774Q6NX45 483 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 OR9K2Q8NGE7 335 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 OR14K1Q8NGZ2 314 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 ZCCHC10Q8TBK6 192 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 RNASE8Q8TDE3 154 aaKnown RBP8.58□□□□□ -1.04
SF3A3-201ENST00000373019 SUSD3Q96L08 255 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 SYT3Q9BQG1 590 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 SGPP1Q9BX95 441 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 FBXO7Q9Y3I1 522 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 CENPVL1A0A0U1RR11 272 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 CYB5AP00167 134 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 CST4P01036 141 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 CA3P07451 260 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 OR4A8P0C604 315 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 EGR3Q06889 387 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 PRAMEF8Q5VWM4 474 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 PRAMEF7Q5VXH5 474 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 FAHD2BQ6P2I3 314 aaPredicted RBP8.58□□□□□ -1.04
SF3A3-201ENST00000373019 ZNF101Q8IZC7 436 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 TMEM239Q8WW34 195 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 FAHD2AQ96GK7 314 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 OR7D2Q96RA2 312 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 CDC6Q99741 560 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 CAPN10Q9HC96 672 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 PRSS16Q9NQE7 514 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 SEMA5BQ9P283 1151 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 OR51B4Q9Y5P0 310 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 HEATR5BQ9P2D3 2071 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 A0A1W2PS29 197 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 DUXAA6NLW8 204 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 H3BSH0 61 aa8.58□□□□□ -1.04
SF3A3-201ENST00000373019 EOMESO95936 686 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms