RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 OR13C3Q8NGS6 347 aa22.11■■□□□ 1.13
CTSA-203ENST00000372459 CPNE4Q96A23 557 aaPredicted RBP22.11■■□□□ 1.13
CTSA-203ENST00000372459 RFT1Q96AA3 541 aa22.11■■□□□ 1.13
CTSA-203ENST00000372459 THAP7Q9BT49 309 aaPredicted RBP22.11■■□□□ 1.13
CTSA-203ENST00000372459 TTTY12Q9BZ98 90 aa22.11■■□□□ 1.13
CTSA-203ENST00000372459 NELFAQ9H3P2 528 aa22.11■■□□□ 1.13
CTSA-203ENST00000372459 ASCL3Q9NQ33 180 aa22.11■■□□□ 1.13
CTSA-203ENST00000372459 CAMK2AQ9UQM7 478 aa22.11■■□□□ 1.13
CTSA-203ENST00000372459 FLVCR1Q9Y5Y0 555 aa22.11■■□□□ 1.13
CTSA-203ENST00000372459 ARGFXA6NJG6 315 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 DHHO43323 396 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 RFC3P40938 356 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 RRADP55042 308 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 ABLIM2Q6H8Q1 611 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 C20orf196Q8IYI0 205 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 ULBP2Q9BZM5 246 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 OR5V1Q9UGF6 321 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 RCE1Q9Y256 329 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 KLF13Q9Y2Y9 288 aaPredicted RBP22.1■■□□□ 1.13
CTSA-203ENST00000372459 ETV7Q9Y603 341 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 OR5H15A6NDH6 313 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 TTLL8A6PVC2 850 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 FAM157BP0CG42 384 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 FSTP19883 344 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 CLDN15P56746 228 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 SCAND1P57086 179 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 CDK10Q15131 360 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 CMTM4Q8IZR5 234 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 ROBO4Q8WZ75 1007 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 PBOV1Q9GZY1 135 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 MOB1AQ9H8S9 216 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 STEAP1Q9UHE8 339 aa22.1■■□□□ 1.13
CTSA-203ENST00000372459 ZNF716A6NP11 495 aa22.09■■□□□ 1.13
CTSA-203ENST00000372459 A8MV72 311 aaPredicted RBP22.09■■□□□ 1.13
CTSA-203ENST00000372459 SP1P08047 785 aa22.09■■□□□ 1.13
CTSA-203ENST00000372459 LIPCP11150 499 aa22.09■■□□□ 1.13
CTSA-203ENST00000372459 CFPP27918 469 aa22.09■■□□□ 1.13
CTSA-203ENST00000372459 PSMA6P60900 246 aaKnown RBP22.09■■□□□ 1.13
CTSA-203ENST00000372459 ZNF57Q68EA5 555 aaPredicted RBP22.09■■□□□ 1.13
CTSA-203ENST00000372459 SLC25A25Q6KCM7 469 aa22.09■■□□□ 1.13
CTSA-203ENST00000372459 ELMOD2Q8IZ81 293 aa22.09■■□□□ 1.13
CTSA-203ENST00000372459 MDS2Q8NDY4 140 aa22.09■■□□□ 1.13
CTSA-203ENST00000372459 RNF170Q96K19 258 aa22.09■■□□□ 1.13
CTSA-203ENST00000372459 ZNF416Q9BWM5 594 aa22.09■■□□□ 1.13
CTSA-203ENST00000372459 RBM24Q9BX46 236 aaKnown RBP22.09■■□□□ 1.13
CTSA-203ENST00000372459 NUFIP1Q9UHK0 495 aaKnown RBP22.09■■□□□ 1.13
CTSA-203ENST00000372459 CNTRLQ7Z7A1 2325 aa22.09■■□□□ 1.13
CTSA-203ENST00000372459 P2RY10O00398 339 aa22.08■■□□□ 1.13
CTSA-203ENST00000372459 RER1O15258 196 aa22.08■■□□□ 1.13
CTSA-203ENST00000372459 LYRM1O43325 122 aa22.08■■□□□ 1.13
CTSA-203ENST00000372459 DOK2O60496 412 aa22.08■■□□□ 1.13
CTSA-203ENST00000372459 CSRP1P21291 193 aaKnown RBP22.08■■□□□ 1.13
CTSA-203ENST00000372459 NBL1P41271 181 aa22.08■■□□□ 1.13
CTSA-203ENST00000372459 MMP15P51511 669 aa22.08■■□□□ 1.13
CTSA-203ENST00000372459 ZNF84P51523 738 aa22.08■■□□□ 1.13
CTSA-203ENST00000372459 PLGLB1Q02325 96 aa22.08■■□□□ 1.13
CTSA-203ENST00000372459 HACD4Q5VWC8 232 aa22.08■■□□□ 1.13
CTSA-203ENST00000372459 SLC25A38Q96DW6 304 aa22.08■■□□□ 1.13
CTSA-203ENST00000372459 DMRTB1Q96MA1 342 aa22.08■■□□□ 1.13
CTSA-203ENST00000372459 ABCG5Q9H222 651 aa22.08■■□□□ 1.13
CTSA-203ENST00000372459 PNRC2Q9NPJ4 139 aaKnown RBP22.08■■□□□ 1.13
CTSA-203ENST00000372459 MRPS7Q9Y2R9 242 aaKnown RBP22.08■■□□□ 1.13
CTSA-203ENST00000372459 EP300Q09472 2414 aaPredicted RBP22.08■■□□□ 1.13
CTSA-203ENST00000372459 A6NL46 340 aa22.08■■□□□ 1.12
CTSA-203ENST00000372459 NME2P1O60361 137 aa22.08■■□□□ 1.12
CTSA-203ENST00000372459 TTRP02766 147 aa22.08■■□□□ 1.12
CTSA-203ENST00000372459 YES1P07947 543 aa22.08■■□□□ 1.12
CTSA-203ENST00000372459 IGFBP3P17936 291 aaPredicted RBP22.08■■□□□ 1.12
CTSA-203ENST00000372459 NME2P22392 152 aa22.08■■□□□ 1.12
CTSA-203ENST00000372459 ASPHD2Q6ICH7 369 aa22.08■■□□□ 1.12
CTSA-203ENST00000372459 UBE2J2Q8N2K1 259 aa22.08■■□□□ 1.12
CTSA-203ENST00000372459 RAB40AQ8WXH6 277 aa22.08■■□□□ 1.12
CTSA-203ENST00000372459 TRIM63Q969Q1 353 aa22.08■■□□□ 1.12
CTSA-203ENST00000372459 MED13Q9UHV7 2174 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 FAM166BA8MTA8 275 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 KLRC4-KLRK1H3BQV0 150 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 EEF1E1O43324 174 aaKnown RBP22.07■■□□□ 1.12
CTSA-203ENST00000372459 ACSM4P0C7M7 580 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 SOX8P57073 446 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 GRB2P62993 217 aaKnown RBP22.07■■□□□ 1.12
CTSA-203ENST00000372459 IGF2-ASQ6U949 168 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 GALNTL5Q7Z4T8 443 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 NOXA1Q86UR1 476 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 TCTE3Q8IZS6 198 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 ASCC1Q8N9N2 400 aaKnown RBP22.07■■□□□ 1.12
CTSA-203ENST00000372459 SYNPRQ8TBG9 265 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 NABP1Q96AH0 204 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 ZNF775Q96BV0 537 aaPredicted RBP22.07■■□□□ 1.12
CTSA-203ENST00000372459 TAS2R4Q9NYW5 299 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 CTDSPLO15194 276 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 CELA3AP09093 270 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 MAGEA5P43359 124 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 LUZP2Q86TE4 346 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 TMEM251Q8N6I4 163 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 S100A16Q96FQ6 103 aaKnown RBP22.07■■□□□ 1.12
CTSA-203ENST00000372459 ZFP3Q96NJ6 502 aa22.07■■□□□ 1.12
CTSA-203ENST00000372459 RANGRFQ9HD47 186 aaPredicted RBP22.07■■□□□ 1.12
CTSA-203ENST00000372459 PHF3Q92576 2039 aaKnown RBP22.06■■□□□ 1.12
CTSA-203ENST00000372459 CYTIPO60759 359 aa22.06■■□□□ 1.12
CTSA-203ENST00000372459 ADRB1P08588 477 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms